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    ZNF438 zinc finger protein 438 [ Bos taurus (cattle) ]

    Gene ID: 510512, updated on 5-Mar-2024

    Summary

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    Official Symbol
    ZNF438provided by VGNC
    Official Full Name
    zinc finger protein 438provided by VGNC
    Primary source
    VGNC:VGNC:37276
    See related
    BGD:BT26020; Ensembl:ENSBTAG00000016294
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 13
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (34231765..34439272)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104973760 Neighboring gene zinc finger E-box binding homeobox 1 Neighboring gene microRNA mir-11998 Neighboring gene uncharacterized LOC101903056 Neighboring gene uncharacterized LOC132346891 Neighboring gene uncharacterized LOC132346892 Neighboring gene uncharacterized LOC132346893

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein 438

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001143772.3 → NP_001137244.1  zinc finger protein 438

      See identical proteins and their annotated locations for NP_001137244.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000013
      UniProtKB/TrEMBL
      F1N281
      Related
      ENSBTAP00000021674.6, ENSBTAT00000021674.7
      Conserved Domains (2) summary
      sd00017
      Location:528 → 544
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl26464
      Location:74 → 378
      Atrophin-1; Atrophin-1 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      34231765..34439272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059892517.1 → XP_059748500.1  zinc finger protein 438 isoform X1

    2. XM_010811223.4 → XP_010809525.1  zinc finger protein 438 isoform X3

      See identical proteins and their annotated locations for XP_010809525.1

      UniProtKB/TrEMBL
      A0A3Q1MME2
      Related
      ENSBTAP00000071620.1, ENSBTAT00000074638.2
      Conserved Domains (2) summary
      sd00017
      Location:560 → 576
      ZF_C2H2; C2H2 Zn finger [structural motif]
      cl26464
      Location:106 → 410
      Atrophin-1; Atrophin-1 family

    3. XM_059892515.1 → XP_059748498.1  zinc finger protein 438 isoform X1

    4. XM_059892523.1 → XP_059748506.1  zinc finger protein 438 isoform X4

    5. XM_059892522.1 → XP_059748505.1  zinc finger protein 438 isoform X1

    6. XM_059892518.1 → XP_059748501.1  zinc finger protein 438 isoform X1

    7. XM_059892516.1 → XP_059748499.1  zinc finger protein 438 isoform X1

    8. XM_059892519.1 → XP_059748502.1  zinc finger protein 438 isoform X1

      Related
      ENSBTAP00000068875.2, ENSBTAT00000073948.2

    9. XM_059892521.1 → XP_059748504.1  zinc finger protein 438 isoform X1

    10. XM_025000477.2 → XP_024856245.1  zinc finger protein 438 isoform X2

      Conserved Domains (3) summary
      sd00017
      Location:582 → 598
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13894
      Location:608 → 631
      zf-C2H2_4; C2H2-type zinc finger
      cl26464
      Location:128 → 432
      Atrophin-1; Atrophin-1 family

    11. XM_059892520.1 → XP_059748503.1  zinc finger protein 438 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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