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    XIRP1 xin actin binding repeat containing 1 [ Bos taurus (cattle) ]

    Gene ID: 509670, updated on 5-Mar-2024

    Summary

    Official Symbol
    XIRP1provided by VGNC
    Official Full Name
    xin actin binding repeat containing 1provided by VGNC
    Primary source
    VGNC:VGNC:36985
    See related
    Ensembl:ENSBTAG00000046512
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    CMYA1
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Location:
    chromosome: 22
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (12509227..12518450, complement)

    Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene golgi reassembly stacking protein 1 Neighboring gene tetratricopeptide repeat domain 21A Neighboring gene cysteine and serine rich nuclear protein 1 Neighboring gene C-C motif chemokine receptor 8 Neighboring gene C-X3-C motif chemokine receptor 1 Neighboring gene alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6-like

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    xin actin-binding repeat-containing protein 1
    Names
    cardiomyopathy associated protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001245928.1NP_001232857.1  xin actin-binding repeat-containing protein 1

      See identical proteins and their annotated locations for NP_001232857.1

      Status: PROVISIONAL

      Source sequence(s)
      HQ111436
      UniProtKB/TrEMBL
      E1AXU0
      Related
      ENSBTAP00000054446.1, ENSBTAT00000065632.2
      Conserved Domains (1) summary
      pfam08043
      Location:550563
      Xin; Xin repeat

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      12509227..12518450 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005222401.5XP_005222458.1  xin actin-binding repeat-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_005222458.1

      UniProtKB/TrEMBL
      E1AXU0
      Conserved Domains (1) summary
      pfam08043
      Location:550563
      Xin; Xin repeat
    2. XM_015459414.3XP_015314900.1  xin actin-binding repeat-containing protein 1 isoform X2

      Related
      ENSBTAP00000095630.1, ENSBTAT00000091585.1
      Conserved Domains (1) summary
      pfam08043
      Location:550563
      Xin; Xin repeat