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    Fam32a family with sequence similarity 32, member A [ Rattus norvegicus (Norway rat) ]

    Gene ID: 498600, updated on 3-Apr-2024

    Summary

    Official Symbol
    Fam32aprovided by RGD
    Official Full Name
    family with sequence similarity 32, member Aprovided by RGD
    Primary source
    RGD:1561287
    See related
    AllianceGenome:RGD:1561287
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    OTAG-12; RGD1561287
    Summary
    Predicted to be involved in apoptotic process. Predicted to be located in nucleoplasm. Predicted to be active in nucleolus. Orthologous to human FAM32A (family with sequence similarity 32 member A). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Brain (RPKM 145.8), Adrenal (RPKM 133.0) and 9 other tissues See more
    Orthologs
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    Genomic context

    Location:
    16p14
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 16 NC_086034.1 (17637078..17641448, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 16 NC_051351.1 (17603054..17607376, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 16 NC_005115.4 (19304522..19308842, complement)

    Chromosome 16 - NC_086034.1Genomic Context describing neighboring genes Neighboring gene epidermal growth factor receptor pathway substrate 15-like 1 Neighboring gene KLF transcription factor 2 Neighboring gene adaptor related protein complex 1 subunit mu 1 Neighboring gene calcium and integrin binding family member 3 Neighboring gene hematopoietic SH2 domain containing Neighboring gene RAB8A, member RAS oncogene family

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Process Evidence Code Pubs
    involved_in apoptotic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleolus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleoplasm ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    protein FAM32A
    Names
    ovarian tumor associated gene 12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001128078.3NP_001121550.1  protein FAM32A

      See identical proteins and their annotated locations for NP_001121550.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000016
      UniProtKB/Swiss-Prot
      B2RYG1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086034.1 Reference GRCr8

      Range
      17637078..17641448 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063275633.1XP_063131703.1  protein FAM32A isoform X2

    2. XM_063275632.1XP_063131702.1  protein FAM32A isoform X1

      UniProtKB/TrEMBL
      A0A8I6AF17