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    metap1 methionyl aminopeptidase 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 496944, updated on 5-Mar-2024

    Summary

    Official Symbol
    metap1provided by Xenbase
    Official Full Name
    methionyl aminopeptidase 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-985733
    See related
    Ensembl:ENSXETG00000009315
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    metap1-a; metap1-b
    Orthologs
    NEW
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    Genomic context

    See metap1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (74837024..74850512, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (65476296..65489884, complement)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene alcohol dehydrogenase 4 (class II), pi polypeptide Neighboring gene alcohol dehydrogenase 5 (class III), chi polypeptide Neighboring gene uncharacterized LOC116411445 Neighboring gene eukaryotic translation initiation factor 4E Neighboring gene small Cajal body-specific RNA 15

    Genomic regions, transcripts, and products

    Pathways from PubChem

    General gene information

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables aminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables initiator methionyl aminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables metalloaminopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metalloaminopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables peptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    methionine aminopeptidase 1
    NP_001011454.1
    XP_017948350.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001011454.1NP_001011454.1  methionine aminopeptidase 1

      See identical proteins and their annotated locations for NP_001011454.1

      Status: PROVISIONAL

      Source sequence(s)
      BC088554
      UniProtKB/Swiss-Prot
      Q5I0A0
      UniProtKB/TrEMBL
      A0A5S6JTA7
      Related
      ENSXETP00000087276.2, ENSXETT00000082715.2
      Conserved Domains (1) summary
      PLN03158
      Location:14376
      PLN03158; methionine aminopeptidase; Provisional

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      74837024..74850512 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018092861.2XP_017948350.1  methionine aminopeptidase 1 isoform X1

      UniProtKB/TrEMBL
      A0A5S6JTA7, A0A8J0T1U8