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    COPZ2 COPI coat complex subunit zeta 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 491050, updated on 5-Mar-2024

    Summary

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    Official Symbol
    COPZ2provided by VGNC
    Official Full Name
    COPI coat complex subunit zeta 2provided by VGNC
    Primary source
    VGNC:VGNC:39515
    See related
    Ensembl:ENSCAFG00845016156
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See COPZ2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (25119272..25129208, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (23791655..23801555, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (24276794..24286720, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (23889036..23898954, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (24149682..24159573, complement)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene CDK5 regulatory subunit associated protein 3 Neighboring gene uncharacterized LOC111097535 Neighboring gene microRNA mir-152 Neighboring gene NFE2 like bZIP transcription factor 1 Neighboring gene chromobox 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COPI vesicle coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coatomer subunit zeta-2; LOW QUALITY PROTEIN: coatomer subunit zeta-2
    Names
    coatomer protein complex subunit zeta 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      25119272..25129208 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038676719.1 → XP_038532647.1  coatomer subunit zeta-2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q188, A0A8I3NUI7
      Related
      ENSCAFP00845022721.1, ENSCAFT00845028878.1
      Conserved Domains (1) summary
      cd14829
      Location:47 → 178
      Zeta-COP; zeta subunit of the F-COPI complex

    2. XM_038676718.1 → XP_038532646.1  coatomer subunit zeta-2 isoform X1

      Conserved Domains (1) summary
      cd14829
      Location:47 → 178
      Zeta-COP; zeta subunit of the F-COPI complex

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      23889036..23898954 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038485770.1 → XP_038341698.1  coatomer subunit zeta-2 isoform X2

      Conserved Domains (1) summary
      cd14829
      Location:47 → 178
      Zeta-COP; zeta subunit of the F-COPI complex

    2. XM_038485769.1 → XP_038341697.1  coatomer subunit zeta-2 isoform X1

      Conserved Domains (1) summary
      cd14829
      Location:47 → 178
      Zeta-COP; zeta subunit of the F-COPI complex

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      24149682..24159573 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038611522.1 → XP_038467450.1  LOW QUALITY PROTEIN: coatomer subunit zeta-2 isoform X2

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      24276794..24286720 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038547547.1 → XP_038403475.1  coatomer subunit zeta-2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q188, A0A8I3NUI7
      Conserved Domains (1) summary
      cd14829
      Location:47 → 178
      Zeta-COP; zeta subunit of the F-COPI complex

    2. XM_038547546.1 → XP_038403474.1  coatomer subunit zeta-2 isoform X1

      Conserved Domains (1) summary
      cd14829
      Location:47 → 178
      Zeta-COP; zeta subunit of the F-COPI complex

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      23791655..23801555 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038604920.1 → XP_038460848.1  coatomer subunit zeta-2 isoform X2

      UniProtKB/TrEMBL
      A0A8C0Q188, A0A8I3NUI7
      Conserved Domains (1) summary
      cd14829
      Location:47 → 178
      Zeta-COP; zeta subunit of the F-COPI complex

    2. XM_038604909.1 → XP_038460837.1  coatomer subunit zeta-2 isoform X1

      Conserved Domains (1) summary
      cd14829
      Location:47 → 178
      Zeta-COP; zeta subunit of the F-COPI complex
    Nucleotide Protein
    Heading Accession and Version

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