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    TRIM22 tripartite motif containing 22 [ Canis lupus familiaris (dog) ]

    Gene ID: 485284, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TRIM22provided by VGNC
    Official Full Name
    tripartite motif containing 22provided by VGNC
    Primary source
    VGNC:VGNC:52856
    See related
    Ensembl:ENSCAFG00845021778
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human all
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    Genomic context

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    Location:
    chromosome: 21
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 21 NC_051825.1 (29507880..29521677)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 21 NC_006603.4 (28462465..28475958)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 21 NC_049242.1 (29155914..29169397)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 21 NC_049281.1 (28814826..28828411)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 21 NC_049762.1 (29020853..29034328)

    Chromosome 21 - NC_051825.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 34 Neighboring gene uncharacterized LOC119864892 Neighboring gene olfactory receptor family 52 subfamily H member 9 Neighboring gene olfactory receptor family 52 subfamily H member 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase TRIM22; LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM22
    XP_038286247.1
    XP_038362047.1
    XP_038424783.1
    XP_038488949.1
    XP_542402.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051825.1 Reference ROS_Cfam_1.0

      Range
      29507880..29521677
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038430319.1 → XP_038286247.1  E3 ubiquitin-protein ligase TRIM22 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RHH6, A0A8C0T0B1, A0A8I3PE47
      Related
      ENSCAFP00845030085.1, ENSCAFT00845038426.1
      Conserved Domains (4) summary
      TIGR02168
      Location:116 → 237
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd16591
      Location:12 → 60
      RING-HC_TRIM5_like-C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins TRIM5, TRIM6, TRIM22, TRIM34 and similar proteins
      cl00034
      Location:92 → 130
      Bbox_SF; B-box-type zinc finger superfamily
      cl02614
      Location:295 → 492
      SPRY; SPRY domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049281.1 Alternate UMICH_Zoey_3.1

      Range
      28814826..28828411
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038506119.1 → XP_038362047.1  LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM22 isoform X2

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049762.1 Alternate UNSW_CanFamBas_1.0

      Range
      29020853..29034328
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038633021.1 → XP_038488949.1  E3 ubiquitin-protein ligase TRIM22 isoform X1

      Conserved Domains (4) summary
      TIGR02168
      Location:116 → 237
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd16591
      Location:12 → 60
      RING-HC_TRIM5_like-C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins TRIM5, TRIM6, TRIM22, TRIM34 and similar proteins
      cl00034
      Location:92 → 130
      Bbox_SF; B-box-type zinc finger superfamily
      cl02614
      Location:295 → 492
      SPRY; SPRY domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049242.1 Alternate UU_Cfam_GSD_1.0

      Range
      29155914..29169397
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038568855.1 → XP_038424783.1  E3 ubiquitin-protein ligase TRIM22 isoform X1

      UniProtKB/TrEMBL
      A0A8C0RHH6, A0A8C0T0B1, A0A8I3PE47
      Conserved Domains (4) summary
      TIGR02168
      Location:116 → 237
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd16591
      Location:12 → 60
      RING-HC_TRIM5_like-C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins TRIM5, TRIM6, TRIM22, TRIM34 and similar proteins
      cl00034
      Location:92 → 130
      Bbox_SF; B-box-type zinc finger superfamily
      cl02614
      Location:295 → 492
      SPRY; SPRY domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006603.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      28462465..28475958
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_542402.8 → XP_542402.2  E3 ubiquitin-protein ligase TRIM22 isoform X1

      See identical proteins and their annotated locations for XP_542402.2

      UniProtKB/TrEMBL
      A0A8C0RHH6, A0A8C0T0B1, A0A8I3PE47
      Conserved Domains (4) summary
      TIGR02168
      Location:116 → 237
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd16591
      Location:12 → 60
      RING-HC_TRIM5_like-C-IV; RING finger, HC subclass, found in tripartite motif-containing proteins TRIM5, TRIM6, TRIM22, TRIM34 and similar proteins
      cl00034
      Location:92 → 130
      Bbox_SF; B-box-type zinc finger superfamily
      cl02614
      Location:295 → 492
      SPRY; SPRY domain
    Nucleotide Protein
    Heading Accession and Version

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