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    TRAPPC5 trafficking protein particle complex subunit 5 [ Canis lupus familiaris (dog) ]

    Gene ID: 484997, updated on 5-Mar-2024

    Summary

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    Official Symbol
    TRAPPC5provided by VGNC
    Official Full Name
    trafficking protein particle complex subunit 5provided by VGNC
    Primary source
    VGNC:VGNC:47784
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 20
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (52974113..52976084)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (52248826..52250788)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (52852667..52854638)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (52177817..52179778)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (52621433..52623395)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene resistin Neighboring gene mast cell expressed membrane protein 1 Neighboring gene Fc epsilon receptor II Neighboring gene C-type lectin domain family 4 member G

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of TRAPPI protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of TRAPPII protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of TRAPPIII protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trafficking protein particle complex subunit 5
    Names
    trafficking protein particle complex 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      52974113..52976084
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038428781.1 → XP_038284709.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    2. XM_038428783.1 → XP_038284711.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    3. XM_038428784.1 → XP_038284712.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    4. XM_038428785.1 → XP_038284713.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    5. XM_038428786.1 → XP_038284714.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      52177817..52179778
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038504417.1 → XP_038360345.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    2. XM_038504418.1 → XP_038360346.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    3. XM_038504419.1 → XP_038360347.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    4. XM_038504420.1 → XP_038360348.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    5. XM_038504421.1 → XP_038360349.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      52621433..52623395
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038631608.1 → XP_038487536.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    2. XM_038631609.1 → XP_038487537.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    3. XM_038631610.1 → XP_038487538.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    4. XM_038631611.1 → XP_038487539.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    5. XM_038631612.1 → XP_038487540.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      52852667..52854638
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038567460.1 → XP_038423388.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    2. XM_038567461.1 → XP_038423389.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    3. XM_038567462.1 → XP_038423390.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    4. XM_038567463.1 → XP_038423391.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    5. XM_038567464.1 → XP_038423392.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      52248826..52250788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005632939.4 → XP_005632996.1  trafficking protein particle complex subunit 5

      See identical proteins and their annotated locations for XP_005632996.1

      UniProtKB/TrEMBL
      E2RBU4
      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    2. XM_038455743.1 → XP_038311671.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    3. XM_038455744.1 → XP_038311672.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    4. XM_005632940.4 → XP_005632997.1  trafficking protein particle complex subunit 5

      See identical proteins and their annotated locations for XP_005632997.1

      UniProtKB/TrEMBL
      E2RBU4
      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex

    5. XM_038455745.1 → XP_038311673.1  trafficking protein particle complex subunit 5

      Conserved Domains (1) summary
      cd14943
      Location:24 → 175
      TRAPPC5_Trs31; Trs31 subunit of the TRAPP complex
    Nucleotide Protein
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