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    SAMD15 sterile alpha motif domain containing 15 [ Canis lupus familiaris (dog) ]

    Gene ID: 480401, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SAMD15provided by VGNC
    Official Full Name
    sterile alpha motif domain containing 15provided by VGNC
    Primary source
    VGNC:VGNC:45850
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SAMD15 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 8 NC_051812.1 (50416115..50427154)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 8 NC_006590.4 (49869999..49881035)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 8 NC_049229.1 (50499750..50510788)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 8 NC_049268.1 (50078713..50089749)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 8 NC_049749.1 (50102003..50112815)

    Chromosome 8 - NC_051812.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase zeta 1 Neighboring gene transmembrane p24 trafficking protein family member 8 Neighboring gene NADP dependent oxidoreductase domain containing 1 Neighboring gene VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog Neighboring gene activator of HSP90 ATPase activity 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sterile alpha motif domain-containing protein 15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051812.1 Reference ROS_Cfam_1.0

      Range
      50416115..50427154
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038674324.1 → XP_038530252.1  sterile alpha motif domain-containing protein 15 isoform X1

      UniProtKB/TrEMBL
      A0A8P0NIJ5
      Conserved Domains (3) summary
      cd09530
      Location:519 → 585
      SAM_Samd14; SAM domain of Samd14 subfamily
      PRK13108
      Location:3 → 167
      PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
      NF033838
      Location:44 → 364
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form

    2. XM_038674325.1 → XP_038530253.1  sterile alpha motif domain-containing protein 15 isoform X2

      Conserved Domains (3) summary
      PRK13108
      Location:3 → 167
      PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
      NF033838
      Location:44 → 364
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form
      cl15755
      Location:519 → 574
      SAM_superfamily; SAM (Sterile alpha motif )

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049268.1 Alternate UMICH_Zoey_3.1

      Range
      50078713..50089749
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038483918.1 → XP_038339846.1  sterile alpha motif domain-containing protein 15 isoform X1

      Conserved Domains (3) summary
      cd09530
      Location:519 → 585
      SAM_Samd14; SAM domain of Samd14 subfamily
      PRK13108
      Location:3 → 167
      PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
      NF033838
      Location:44 → 364
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form

    2. XM_038483919.1 → XP_038339847.1  sterile alpha motif domain-containing protein 15 isoform X2

      Conserved Domains (3) summary
      PRK13108
      Location:3 → 167
      PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
      NF033838
      Location:44 → 364
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form
      cl15755
      Location:519 → 574
      SAM_superfamily; SAM (Sterile alpha motif )

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049749.1 Alternate UNSW_CanFamBas_1.0

      Range
      50102003..50112815
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038609502.1 → XP_038465430.1  sterile alpha motif domain-containing protein 15 isoform X1

    2. XM_038609503.1 → XP_038465431.1  sterile alpha motif domain-containing protein 15 isoform X2

      Conserved Domains (3) summary
      PRK13108
      Location:3 → 167
      PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
      NF033838
      Location:44 → 364
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form
      cl15755
      Location:519 → 574
      SAM_superfamily; SAM (Sterile alpha motif )

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049229.1 Alternate UU_Cfam_GSD_1.0

      Range
      50499750..50510788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038545408.1 → XP_038401336.1  sterile alpha motif domain-containing protein 15 isoform X1

      UniProtKB/TrEMBL
      A0A8P0NIJ5
      Conserved Domains (3) summary
      cd09530
      Location:519 → 585
      SAM_Samd14; SAM domain of Samd14 subfamily
      PRK13108
      Location:3 → 167
      PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
      NF033838
      Location:44 → 364
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form

    2. XM_038545409.1 → XP_038401337.1  sterile alpha motif domain-containing protein 15 isoform X2

      Conserved Domains (3) summary
      PRK13108
      Location:3 → 167
      PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
      NF033838
      Location:44 → 364
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form
      cl15755
      Location:519 → 574
      SAM_superfamily; SAM (Sterile alpha motif )

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      49869999..49881035
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_537522.7 → XP_537522.1  sterile alpha motif domain-containing protein 15 isoform X1

      UniProtKB/TrEMBL
      A0A8P0NIJ5
      Conserved Domains (3) summary
      cd09530
      Location:519 → 585
      SAM_Samd14; SAM domain of Samd14 subfamily
      PRK13108
      Location:3 → 167
      PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
      NF033838
      Location:44 → 364
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form

    2. XM_038592559.1 → XP_038448487.1  sterile alpha motif domain-containing protein 15 isoform X2

      Conserved Domains (3) summary
      PRK13108
      Location:3 → 167
      PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
      NF033838
      Location:44 → 364
      PspC_subgroup_1; pneumococcal surface protein PspC, choline-binding form
      cl15755
      Location:519 → 574
      SAM_superfamily; SAM (Sterile alpha motif )
    Nucleotide Protein
    Heading Accession and Version

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