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    RRN3 RRN3 homolog, RNA polymerase I transcription factor [ Canis lupus familiaris (dog) ]

    Gene ID: 479838, updated on 5-Mar-2024

    Summary

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    Gene symbol
    RRN3
    Gene description
    RRN3 homolog, RNA polymerase I transcription factor
    See related
    Ensembl:ENSCAFG00845010361
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (28641773..28670927, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (29841964..29870919, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (28740669..28769347, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (28444804..28473963, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (28334911..28364048, complement)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene pyridoxal dependent decarboxylase domain containing 1 Neighboring gene small nucleolar RNA SNORD45 Neighboring gene uncharacterized LOC111096299 Neighboring gene N-terminal asparagine amidase Neighboring gene vegetative cell wall protein gp1-like Neighboring gene phospholipase A2 group X

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase I core binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase I general transcription initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription initiation at RNA polymerase I promoter IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA polymerase I-specific transcription initiation factor RRN3
    Names
    RRN3 RNA polymerase I transcription factor homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      28641773..28670927 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038669103.1 → XP_038525031.1  RNA polymerase I-specific transcription initiation factor RRN3

      UniProtKB/TrEMBL
      A0A8C0LDP3, A0A8C0Q2E7, A0A8I3NAG1
      Related
      ENSCAFP00845014242.1, ENSCAFT00845018255.1
      Conserved Domains (1) summary
      pfam05327
      Location:64 → 585
      RRN3; RNA polymerase I specific transcription initiation factor RRN3

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      28444804..28473963 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038479070.1 → XP_038334998.1  RNA polymerase I-specific transcription initiation factor RRN3

      Conserved Domains (1) summary
      pfam05327
      Location:64 → 585
      RRN3; RNA polymerase I specific transcription initiation factor RRN3

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      28334911..28364048 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038604399.1 → XP_038460327.1  RNA polymerase I-specific transcription initiation factor RRN3

      Conserved Domains (1) summary
      pfam05327
      Location:64 → 585
      RRN3; RNA polymerase I specific transcription initiation factor RRN3

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      28740669..28769347 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038540295.1 → XP_038396223.1  RNA polymerase I-specific transcription initiation factor RRN3

      UniProtKB/TrEMBL
      A0A8C0LDP3

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      29841964..29870919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014114608.3 → XP_013970083.1  RNA polymerase I-specific transcription initiation factor RRN3

      UniProtKB/TrEMBL
      A0A8C0LDP3, A0A8C0Q2E7, A0A8I3NAG1
      Conserved Domains (1) summary
      pfam05327
      Location:64 → 585
      RRN3; RNA polymerase I specific transcription initiation factor RRN3
    Nucleotide Protein
    Heading Accession and Version

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