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    SYT17 synaptotagmin 17 [ Canis lupus familiaris (dog) ]

    Gene ID: 479829, updated on 5-Mar-2024

    Summary

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    Gene symbol
    SYT17
    Gene description
    synaptotagmin 17
    See related
    Ensembl:ENSCAFG00845005751
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (26155347..26230485)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (27362444..27437826)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (26239659..26315151)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (25955678..26031052)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (25849907..25925150)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119872191 Neighboring gene ITPRIP like 2 Neighboring gene C-type lectin domain containing 19A Neighboring gene uncharacterized LOC111096499

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium-ion regulated exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dopamine secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      26155347..26230485
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038669055.1 → XP_038524983.1  synaptotagmin-17 isoform X2

      UniProtKB/TrEMBL
      A0A8C0RPG0, A0A8C0RPH2, A0A8I3MX07
      Related
      ENSCAFP00845008000.1, ENSCAFT00845010272.1
      Conserved Domains (2) summary
      cd08390
      Location:186 → 314
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:323 → 457
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    2. XM_038669054.1 → XP_038524982.1  synaptotagmin-17 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L8V8
      Related
      ENSCAFP00845008123.1, ENSCAFT00845010452.1
      Conserved Domains (2) summary
      cd08390
      Location:217 → 345
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:354 → 488
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      25955678..26031052
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038479018.1 → XP_038334946.1  synaptotagmin-17 isoform X2

      Conserved Domains (2) summary
      cd08390
      Location:186 → 314
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:323 → 457
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    2. XM_038479017.1 → XP_038334945.1  synaptotagmin-17 isoform X1

      Conserved Domains (2) summary
      cd08390
      Location:217 → 345
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:354 → 488
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      25849907..25925150
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038604345.1 → XP_038460273.1  synaptotagmin-17 isoform X2

      Conserved Domains (2) summary
      cd08390
      Location:186 → 314
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:323 → 457
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    2. XM_038604344.1 → XP_038460272.1  synaptotagmin-17 isoform X1

      Conserved Domains (2) summary
      cd08390
      Location:217 → 345
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:354 → 488
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      26239659..26315151
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038540247.1 → XP_038396175.1  synaptotagmin-17 isoform X2

      UniProtKB/TrEMBL
      A0A8C0RPG0, A0A8C0RPH2, A0A8I3MX07
      Conserved Domains (2) summary
      cd08390
      Location:186 → 314
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:323 → 457
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    2. XM_038540246.1 → XP_038396174.1  synaptotagmin-17 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L8V8
      Conserved Domains (2) summary
      cd08390
      Location:217 → 345
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:354 → 488
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      27362444..27437826
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038546020.1 → XP_038401948.1  synaptotagmin-17 isoform X2

      UniProtKB/TrEMBL
      A0A8C0RPG0, A0A8C0RPH2, A0A8I3MX07
      Conserved Domains (2) summary
      cd08390
      Location:186 → 314
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:323 → 457
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17

    2. XM_536956.7 → XP_536956.1  synaptotagmin-17 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L8V8
      Conserved Domains (2) summary
      cd08390
      Location:217 → 345
      C2A_Synaptotagmin-15-17; C2A domain first repeat present in Synaptotagmins 15 and 17
      cd08410
      Location:354 → 488
      C2B_Synaptotagmin-17; C2 domain second repeat present in Synaptotagmin 17
    Nucleotide Protein
    Heading Accession and Version

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