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    PLOD3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 479730, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PLOD3provided by VGNC
    Official Full Name
    procollagen-lysine,2-oxoglutarate 5-dioxygenase 3provided by VGNC
    Primary source
    VGNC:VGNC:44703
    See related
    Ensembl:ENSCAFG00845005125
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (8483656..8491120)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (10361502..10368957)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (8579093..8586540)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (8443884..8451311)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (8414481..8421939)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene claudin 15 Neighboring gene uncharacterized LOC119872142 Neighboring gene zinc finger HIT-type containing 1 Neighboring gene monoacylglycerol O-acyltransferase 3 Neighboring gene N-acetyltransferase 16 (putative)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-ascorbic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables procollagen glucosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables procollagen-lysine 5-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-lysine hydroxylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    procollagen-lysine,2-oxoglutarate 5-dioxygenase 3; multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3
    XP_038333876.1
    XP_038395136.1
    XP_038459215.1
    XP_038523920.1
    XP_536856.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      8483656..8491120
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038667992.1 → XP_038523920.1  multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3

      UniProtKB/TrEMBL
      A0A8I3MUP6, A0A8I3MZE0, A0A8P0PBE3, A0A8P0SIG0
      Related
      ENSCAFP00845007231.1, ENSCAFT00845009187.1
      Conserved Domains (1) summary
      smart00702
      Location:575 → 738
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      8443884..8451311
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038477948.1 → XP_038333876.1  multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      8414481..8421939
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038603287.1 → XP_038459215.1  multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      8579093..8586540
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038539208.1 → XP_038395136.1  multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3

      UniProtKB/TrEMBL
      A0A8C0KKK6, A0A8C0MBD9, A0A8C0S9T5

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      10361502..10368957
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_536856.7 → XP_536856.2  multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3

      UniProtKB/TrEMBL
      A0A8I3MUP6, A0A8I3MZE0, A0A8P0PBE3, A0A8P0SIG0
      Conserved Domains (1) summary
      smart00702
      Location:575 → 738
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    Nucleotide Protein
    Heading Accession and Version

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