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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051810.1 Reference ROS_Cfam_1.0
- Range
-
896809..965086
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038667796.1 → XP_038523724.1 rab5 GDP/GTP exchange factor isoform X2
- UniProtKB/TrEMBL
- A0A8C0JXM1, A0A8I3MIP3
- Related
- ENSCAFP00845001029.1, ENSCAFT00845001336.1
- Conserved Domains (3) summary
-
- pfam02204
Location:271 → 371
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:159 → 221
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038667797.1 → XP_038523725.1 rab5 GDP/GTP exchange factor isoform X2
- UniProtKB/TrEMBL
- A0A8C0JXM1, A0A8I3MIP3
- Related
- ENSCAFP00845001011.1, ENSCAFT00845001311.1
- Conserved Domains (3) summary
-
- pfam02204
Location:271 → 371
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:159 → 221
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038667795.1 → XP_038523723.1 rab5 GDP/GTP exchange factor isoform X1
- UniProtKB/TrEMBL
-
A0A8I3MIP3
- Conserved Domains (3) summary
-
- pfam02204
Location:270 → 370
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:158 → 220
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038667799.1 → XP_038523727.1 rab5 GDP/GTP exchange factor isoform X4
- UniProtKB/TrEMBL
-
A0A8C0JX23
- Conserved Domains (2) summary
-
- pfam02204
Location:299 → 399
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:187 → 249
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038667798.1 → XP_038523726.1 rab5 GDP/GTP exchange factor isoform X3
- Conserved Domains (2) summary
-
- pfam02204
Location:78 → 178
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:9 → 28
- DUF5601; Domain of unknown function (DUF5601)
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049266.1 Alternate UMICH_Zoey_3.1
- Range
-
831713..899916
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038477751.1 → XP_038333679.1 rab5 GDP/GTP exchange factor isoform X2
- Conserved Domains (3) summary
-
- pfam02204
Location:271 → 371
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:159 → 221
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038477753.1 → XP_038333681.1 rab5 GDP/GTP exchange factor isoform X2
- Conserved Domains (3) summary
-
- pfam02204
Location:271 → 371
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:159 → 221
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038477750.1 → XP_038333678.1 rab5 GDP/GTP exchange factor isoform X1
- Conserved Domains (3) summary
-
- pfam02204
Location:270 → 370
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:158 → 220
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038477755.1 → XP_038333683.1 rab5 GDP/GTP exchange factor isoform X4
- Conserved Domains (2) summary
-
- pfam02204
Location:299 → 399
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:187 → 249
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038477754.1 → XP_038333682.1 rab5 GDP/GTP exchange factor isoform X3
- Conserved Domains (2) summary
-
- pfam02204
Location:78 → 178
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:9 → 28
- DUF5601; Domain of unknown function (DUF5601)
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049747.1 Alternate UNSW_CanFamBas_1.0
- Range
-
833940..901951
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038603091.1 → XP_038459019.1 rab5 GDP/GTP exchange factor isoform X2
- Conserved Domains (3) summary
-
- pfam02204
Location:271 → 371
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:159 → 221
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038603092.1 → XP_038459020.1 rab5 GDP/GTP exchange factor isoform X2
- Conserved Domains (3) summary
-
- pfam02204
Location:271 → 371
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:159 → 221
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038603090.1 → XP_038459018.1 rab5 GDP/GTP exchange factor isoform X1
- Conserved Domains (3) summary
-
- pfam02204
Location:270 → 370
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:158 → 220
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038603094.1 → XP_038459022.1 rab5 GDP/GTP exchange factor isoform X4
- Conserved Domains (2) summary
-
- pfam02204
Location:299 → 399
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:187 → 249
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038603093.1 → XP_038459021.1 rab5 GDP/GTP exchange factor isoform X3
- Conserved Domains (2) summary
-
- pfam02204
Location:78 → 178
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:9 → 28
- DUF5601; Domain of unknown function (DUF5601)
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049227.1 Alternate UU_Cfam_GSD_1.0
- Range
-
1005706..1073713
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038538997.1 → XP_038394925.1 rab5 GDP/GTP exchange factor isoform X2
- UniProtKB/TrEMBL
- A0A8C0JXM1, A0A8I3MIP3
- Conserved Domains (3) summary
-
- pfam02204
Location:271 → 371
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:159 → 221
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038538998.1 → XP_038394926.1 rab5 GDP/GTP exchange factor isoform X2
- UniProtKB/TrEMBL
- A0A8C0JXM1, A0A8I3MIP3
- Conserved Domains (3) summary
-
- pfam02204
Location:271 → 371
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:159 → 221
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038538996.1 → XP_038394924.1 rab5 GDP/GTP exchange factor isoform X1
- UniProtKB/TrEMBL
-
A0A8I3MIP3
- Conserved Domains (3) summary
-
- pfam02204
Location:270 → 370
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:158 → 220
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038539000.1 → XP_038394928.1 rab5 GDP/GTP exchange factor isoform X4
- UniProtKB/TrEMBL
-
A0A8C0JX23
- Conserved Domains (2) summary
-
- pfam02204
Location:299 → 399
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:187 → 249
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038538999.1 → XP_038394927.1 rab5 GDP/GTP exchange factor isoform X3
- Conserved Domains (2) summary
-
- pfam02204
Location:78 → 178
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:9 → 28
- DUF5601; Domain of unknown function (DUF5601)
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
2815410..2859509
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038535870.1 → XP_038391798.1 rab5 GDP/GTP exchange factor isoform X5
- UniProtKB/TrEMBL
-
A0A8I3MIP3
- Conserved Domains (3) summary
-
- pfam02204
Location:275 → 375
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:159 → 225
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038535874.1 → XP_038391802.1 rab5 GDP/GTP exchange factor isoform X6
- UniProtKB/TrEMBL
-
A0A8I3MIP3
- Conserved Domains (3) summary
-
- pfam02204
Location:274 → 374
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam01754
Location:17 → 39
- zf-A20; A20-like zinc finger
- pfam18151
Location:158 → 224
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038535880.1 → XP_038391808.1 rab5 GDP/GTP exchange factor isoform X7
- UniProtKB/TrEMBL
-
A0A8C0JX23
- Conserved Domains (2) summary
-
- pfam02204
Location:303 → 403
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:187 → 253
- DUF5601; Domain of unknown function (DUF5601)
-
XM_014114146.3 → XP_013969621.2 rab5 GDP/GTP exchange factor isoform X3
- Conserved Domains (2) summary
-
- pfam02204
Location:78 → 178
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:9 → 28
- DUF5601; Domain of unknown function (DUF5601)
-
XM_038535861.1 → XP_038391789.1 rab5 GDP/GTP exchange factor isoform X3
- Conserved Domains (2) summary
-
- pfam02204
Location:78 → 178
- VPS9; Vacuolar sorting protein 9 (VPS9) domain
- pfam18151
Location:9 → 28
- DUF5601; Domain of unknown function (DUF5601)