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    PMS1 PMS1 homolog 1, mismatch repair system component [ Canis lupus familiaris (dog) ]

    Gene ID: 478840, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PMS1provided by VGNC
    Official Full Name
    PMS1 homolog 1, mismatch repair system componentprovided by VGNC
    Primary source
    VGNC:VGNC:44738
    See related
    Ensembl:ENSCAFG00845023737
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See PMS1 in Genome Data Viewer
    Location:
    chromosome: 37
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 37 NC_051841.1 (395761..503686)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 37 NC_006619.4 (1475758..1583050)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 37 NC_049258.1 (403027..510344)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 37 NC_049297.1 (406588..513890)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 37 NC_049778.1 (375065..482126)

    Chromosome 37 - NC_051841.1Genomic Context describing neighboring genes Neighboring gene ankyrin and armadillo repeat containing Neighboring gene O-sialoglycoprotein endopeptidase like 1 Neighboring gene chromobox protein homolog 3-like Neighboring gene ORMDL sphingolipid biosynthesis regulator 1 Neighboring gene uncharacterized LOC111094315 Neighboring gene chromosome 37 C2orf88 homolog Neighboring gene uncharacterized LOC119867913

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent DNA damage sensor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mismatched DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mismatch repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of MutLalpha complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PMS1 protein homolog 1
    Names
    PMS1 postmeiotic segregation increased 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051841.1 Reference ROS_Cfam_1.0

      Range
      395761..503686
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038447368.1 → XP_038303296.1  PMS1 protein homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0SFT3
      Conserved Domains (2) summary
      cd01390
      Location:553 → 617
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:26 → 299
      mutl; DNA mismatch repair protein MutL

    2. XM_038447362.1 → XP_038303290.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Related
      ENSCAFP00845032953.1, ENSCAFT00845042016.1
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    3. XM_038447364.1 → XP_038303292.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    4. XM_038447366.1 → XP_038303294.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    5. XM_038447361.1 → XP_038303289.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    6. XM_038447371.1 → XP_038303299.1  PMS1 protein homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0SG34, A0A8C0YX58, A0A8I3PQ09, A0A8I3S400
      Related
      ENSCAFP00845033169.1, ENSCAFT00845042313.1
      Conserved Domains (2) summary
      cd01390
      Location:483 → 547
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 234
      mutl; DNA mismatch repair protein MutL

    7. XM_038447370.1 → XP_038303298.1  PMS1 protein homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NLA3, A0A8C0SFT3, A0A8I3S833
      Related
      ENSCAFP00845033439.1, ENSCAFT00845042645.1
      Conserved Domains (3) summary
      COG0323
      Location:2 → 287
      MutL; DNA mismatch repair ATPase MutL [Replication, recombination and repair]
      cd01390
      Location:511 → 575
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      cd03485
      Location:144 → 277
      MutL_Trans_hPMS_1_like; MutL_Trans_hPMS1_like: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to human PSM1 (hPSM1) and yeast MLH2. hPSM1 and yMLH2 are members of the DNA mismatch repair (MutL/MLH1/PMS2) family. This transducer domain is ...

    8. XM_038447369.1 → XP_038303297.1  PMS1 protein homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0NHH8, A0A8I3PGW9, A0A8P0NBJ7
      Related
      ENSCAFP00845033543.1, ENSCAFT00845042791.1
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    9. XM_038447372.1 → XP_038303300.1  PMS1 protein homolog 1 isoform X6

      UniProtKB/TrEMBL
      A0A8I3PGW9, A0A8P0NBJ7
      Related
      ENSCAFP00845033344.1, ENSCAFT00845042536.1
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    10. XM_038447373.1 → XP_038303301.1  PMS1 protein homolog 1 isoform X7

      Conserved Domains (1) summary
      TIGR00585
      Location:1 → 193
      mutl; DNA mismatch repair protein MutL

    11. XM_038447363.1 → XP_038303291.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    12. XM_038447367.1 → XP_038303295.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    13. XM_038447365.1 → XP_038303293.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049297.1 Alternate UMICH_Zoey_3.1

      Range
      406588..513890
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038521429.1 → XP_038377357.1  PMS1 protein homolog 1 isoform X2

      Conserved Domains (2) summary
      cd01390
      Location:553 → 617
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:26 → 299
      mutl; DNA mismatch repair protein MutL

    2. XM_038521422.1 → XP_038377350.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    3. XM_038521424.1 → XP_038377352.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    4. XM_038521427.1 → XP_038377355.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    5. XM_038521421.1 → XP_038377349.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    6. XM_038521432.1 → XP_038377360.1  PMS1 protein homolog 1 isoform X5

      Conserved Domains (2) summary
      cd01390
      Location:483 → 547
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 234
      mutl; DNA mismatch repair protein MutL

    7. XM_038521431.1 → XP_038377359.1  PMS1 protein homolog 1 isoform X4

      Conserved Domains (3) summary
      COG0323
      Location:2 → 287
      MutL; DNA mismatch repair ATPase MutL [Replication, recombination and repair]
      cd01390
      Location:511 → 575
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      cd03485
      Location:144 → 277
      MutL_Trans_hPMS_1_like; MutL_Trans_hPMS1_like: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to human PSM1 (hPSM1) and yeast MLH2. hPSM1 and yMLH2 are members of the DNA mismatch repair (MutL/MLH1/PMS2) family. This transducer domain is ...

    8. XM_038521430.1 → XP_038377358.1  PMS1 protein homolog 1 isoform X3

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    9. XM_038521433.1 → XP_038377361.1  PMS1 protein homolog 1 isoform X6

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    10. XM_038521434.1 → XP_038377362.1  PMS1 protein homolog 1 isoform X7

      Conserved Domains (1) summary
      TIGR00585
      Location:1 → 193
      mutl; DNA mismatch repair protein MutL

    11. XM_038521423.1 → XP_038377351.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    12. XM_038521428.1 → XP_038377356.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    13. XM_038521425.1 → XP_038377353.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049778.1 Alternate UNSW_CanFamBas_1.0

      Range
      375065..482126
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038649543.1 → XP_038505471.1  PMS1 protein homolog 1 isoform X2

      Conserved Domains (2) summary
      cd01390
      Location:553 → 617
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:26 → 299
      mutl; DNA mismatch repair protein MutL

    2. XM_038649537.1 → XP_038505465.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    3. XM_038649539.1 → XP_038505467.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    4. XM_038649541.1 → XP_038505469.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    5. XM_038649536.1 → XP_038505464.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    6. XM_038649546.1 → XP_038505474.1  PMS1 protein homolog 1 isoform X5

      Conserved Domains (2) summary
      cd01390
      Location:483 → 547
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 234
      mutl; DNA mismatch repair protein MutL

    7. XM_038649545.1 → XP_038505473.1  PMS1 protein homolog 1 isoform X4

      Conserved Domains (3) summary
      COG0323
      Location:2 → 287
      MutL; DNA mismatch repair ATPase MutL [Replication, recombination and repair]
      cd01390
      Location:511 → 575
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      cd03485
      Location:144 → 277
      MutL_Trans_hPMS_1_like; MutL_Trans_hPMS1_like: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to human PSM1 (hPSM1) and yeast MLH2. hPSM1 and yMLH2 are members of the DNA mismatch repair (MutL/MLH1/PMS2) family. This transducer domain is ...

    8. XM_038649544.1 → XP_038505472.1  PMS1 protein homolog 1 isoform X3

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    9. XM_038649547.1 → XP_038505475.1  PMS1 protein homolog 1 isoform X6

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    10. XM_038649548.1 → XP_038505476.1  PMS1 protein homolog 1 isoform X7

      Conserved Domains (1) summary
      TIGR00585
      Location:1 → 193
      mutl; DNA mismatch repair protein MutL

    11. XM_038649538.1 → XP_038505466.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    12. XM_038649542.1 → XP_038505470.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    13. XM_038649540.1 → XP_038505468.1  PMS1 protein homolog 1 isoform X1

      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049258.1 Alternate UU_Cfam_GSD_1.0

      Range
      403027..510344
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038585133.1 → XP_038441061.1  PMS1 protein homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0SFT3
      Conserved Domains (2) summary
      cd01390
      Location:553 → 617
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:26 → 299
      mutl; DNA mismatch repair protein MutL

    2. XM_038585127.1 → XP_038441055.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    3. XM_038585129.1 → XP_038441057.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    4. XM_038585131.1 → XP_038441059.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    5. XM_038585126.1 → XP_038441054.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    6. XM_038585136.1 → XP_038441064.1  PMS1 protein homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0SG34, A0A8C0YX58, A0A8I3PQ09, A0A8I3S400
      Conserved Domains (2) summary
      cd01390
      Location:483 → 547
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 234
      mutl; DNA mismatch repair protein MutL

    7. XM_038585135.1 → XP_038441063.1  PMS1 protein homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NLA3, A0A8C0SFT3, A0A8I3S833
      Conserved Domains (3) summary
      COG0323
      Location:2 → 287
      MutL; DNA mismatch repair ATPase MutL [Replication, recombination and repair]
      cd01390
      Location:511 → 575
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      cd03485
      Location:144 → 277
      MutL_Trans_hPMS_1_like; MutL_Trans_hPMS1_like: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to human PSM1 (hPSM1) and yeast MLH2. hPSM1 and yMLH2 are members of the DNA mismatch repair (MutL/MLH1/PMS2) family. This transducer domain is ...

    8. XM_038585134.1 → XP_038441062.1  PMS1 protein homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0NHH8, A0A8I3PGW9, A0A8P0NBJ7
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    9. XM_038585137.1 → XP_038441065.1  PMS1 protein homolog 1 isoform X6

      UniProtKB/TrEMBL
      A0A8I3PGW9, A0A8P0NBJ7
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    10. XM_038585138.1 → XP_038441066.1  PMS1 protein homolog 1 isoform X7

      Conserved Domains (1) summary
      TIGR00585
      Location:1 → 193
      mutl; DNA mismatch repair protein MutL

    11. XM_038585128.1 → XP_038441056.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    12. XM_038585132.1 → XP_038441060.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    13. XM_038585130.1 → XP_038441058.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006619.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      1475758..1583050
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014110947.3 → XP_013966422.1  PMS1 protein homolog 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C0SFT3
      Conserved Domains (2) summary
      cd01390
      Location:553 → 617
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:26 → 299
      mutl; DNA mismatch repair protein MutL

    2. XM_005640441.4 → XP_005640498.1  PMS1 protein homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005640498.1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    3. XM_005640443.4 → XP_005640500.1  PMS1 protein homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005640500.1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    4. XM_038463874.1 → XP_038319802.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    5. XM_536002.7 → XP_536002.1  PMS1 protein homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_536002.1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    6. XM_022414963.2 → XP_022270671.1  PMS1 protein homolog 1 isoform X5

      UniProtKB/TrEMBL
      A0A8C0SG34, A0A8C0YX58, A0A8I3PQ09, A0A8I3S400
      Conserved Domains (2) summary
      cd01390
      Location:483 → 547
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 234
      mutl; DNA mismatch repair protein MutL

    7. XM_005640447.4 → XP_005640504.1  PMS1 protein homolog 1 isoform X4

      UniProtKB/TrEMBL
      A0A8C0NLA3, A0A8C0SFT3, A0A8I3S833
      Conserved Domains (3) summary
      COG0323
      Location:2 → 287
      MutL; DNA mismatch repair ATPase MutL [Replication, recombination and repair]
      cd01390
      Location:511 → 575
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      cd03485
      Location:144 → 277
      MutL_Trans_hPMS_1_like; MutL_Trans_hPMS1_like: transducer domain, having a ribosomal S5 domain 2-like fold, found in proteins similar to human PSM1 (hPSM1) and yeast MLH2. hPSM1 and yMLH2 are members of the DNA mismatch repair (MutL/MLH1/PMS2) family. This transducer domain is ...

    8. XM_022414962.2 → XP_022270670.1  PMS1 protein homolog 1 isoform X3

      UniProtKB/TrEMBL
      A0A8C0NHH8, A0A8I3PGW9, A0A8P0NBJ7
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    9. XM_005640449.4 → XP_005640506.1  PMS1 protein homolog 1 isoform X6

      UniProtKB/TrEMBL
      A0A8I3PGW9, A0A8P0NBJ7
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    10. XM_038463875.1 → XP_038319803.1  PMS1 protein homolog 1 isoform X7

      Conserved Domains (1) summary
      TIGR00585
      Location:1 → 193
      mutl; DNA mismatch repair protein MutL

    11. XM_005640442.4 → XP_005640499.1  PMS1 protein homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005640499.1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    12. XM_014110946.3 → XP_013966421.1  PMS1 protein homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL

    13. XM_005640444.4 → XP_005640501.1  PMS1 protein homolog 1 isoform X1

      See identical proteins and their annotated locations for XP_005640501.1

      UniProtKB/TrEMBL
      A0A8C0NK78, A0A8C0SFT3, A0A8I3PNE6
      Conserved Domains (2) summary
      cd01390
      Location:572 → 636
      HMGB-UBF_HMG-box; class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal ...
      TIGR00585
      Location:1 → 318
      mutl; DNA mismatch repair protein MutL
    Nucleotide Protein
    Heading Accession and Version

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