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    FARSA phenylalanyl-tRNA synthetase subunit alpha [ Canis lupus familiaris (dog) ]

    Gene ID: 476695, updated on 5-Mar-2024

    Summary

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    Official Symbol
    FARSAprovided by VGNC
    Official Full Name
    phenylalanyl-tRNA synthetase subunit alphaprovided by VGNC
    Primary source
    VGNC:VGNC:40733
    See related
    Ensembl:ENSCAFG00845015291
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 20
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (49775682..49784201)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (49131070..49139532)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (49655888..49664348)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (48986876..48995337)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (49413365..49421812)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene RAD23 homolog A, nucleotide excision repair protein Neighboring gene calreticulin Neighboring gene synaptonemal complex central element protein 2 Neighboring gene glutaryl-CoA dehydrogenase Neighboring gene KLF transcription factor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phenylalanine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phenylalanyl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of phenylalanine-tRNA ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phenylalanine--tRNA ligase alpha subunit
    Names
    phenylalanyl-tRNA synthetase alpha subunit
    XP_038284379.1
    XP_038360023.1
    XP_038423052.1
    XP_038487195.1
    XP_533900.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      49775682..49784201
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038428451.1 → XP_038284379.1  phenylalanine--tRNA ligase alpha subunit

      UniProtKB/TrEMBL
      A0A8C0P139, A0A8C0QVU1, A0A8C0TLJ6, A0A8I3NTN9, A0A8I3NX27
      Related
      ENSCAFP00845021512.1, ENSCAFT00845027330.1
      Conserved Domains (1) summary
      PLN02853
      Location:8 → 496
      PLN02853; Probable phenylalanyl-tRNA synthetase alpha chain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      48986876..48995337
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038504095.1 → XP_038360023.1  phenylalanine--tRNA ligase alpha subunit

      Conserved Domains (1) summary
      PLN02853
      Location:8 → 496
      PLN02853; Probable phenylalanyl-tRNA synthetase alpha chain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      49413365..49421812
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038631267.1 → XP_038487195.1  phenylalanine--tRNA ligase alpha subunit

      Conserved Domains (1) summary
      PLN02853
      Location:8 → 496
      PLN02853; Probable phenylalanyl-tRNA synthetase alpha chain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      49655888..49664348
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038567124.1 → XP_038423052.1  phenylalanine--tRNA ligase alpha subunit

      UniProtKB/TrEMBL
      A0A8C0P139, A0A8C0QVU1, A0A8C0TLJ6, A0A8I3NTN9, A0A8I3NX27
      Conserved Domains (1) summary
      PLN02853
      Location:8 → 496
      PLN02853; Probable phenylalanyl-tRNA synthetase alpha chain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      49131070..49139532
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_533900.7 → XP_533900.1  phenylalanine--tRNA ligase alpha subunit

      UniProtKB/TrEMBL
      A0A8C0P139, A0A8C0QVU1, A0A8C0TLJ6, A0A8I3NTN9, A0A8I3NX27
      Conserved Domains (1) summary
      PLN02853
      Location:8 → 496
      PLN02853; Probable phenylalanyl-tRNA synthetase alpha chain
    Nucleotide Protein
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