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    SUGP1 SURP and G-patch domain containing 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 476661, updated on 5-Mar-2024

    Summary

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    Official Symbol
    SUGP1provided by VGNC
    Official Full Name
    SURP and G-patch domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:46972
    See related
    Ensembl:ENSCAFG00845014514
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    SF4
    Orthologs
    human mouse all
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    Genomic context

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    See SUGP1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (44379426..44410890)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (43808689..43840117)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (44301796..44333296)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (43616943..43648396)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (44026542..44058007)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene GATA zinc finger domain containing 2A Neighboring gene uncharacterized LOC119864709 Neighboring gene MAU2 sister chromatid cohesion factor Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane 6 superfamily member 2 Neighboring gene hyaluronan and proteoglycan link protein 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SURP and G-patch domain-containing protein 1
    Names
    splicing factor 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      44379426..44410890
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038428057.1 → XP_038283985.1  SURP and G-patch domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8C0KIB1, A0A8C0N357, A0A8C0N7X5, A0A8I3NUQ4, A0A8I3S0X7
      Related
      ENSCAFP00845020468.1, ENSCAFT00845025965.1
      Conserved Domains (2) summary
      smart00443
      Location:551 → 597
      G_patch; glycine rich nucleic binding domain
      pfam01805
      Location:181 → 232
      Surp; Surp module

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      43616943..43648396
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038503716.1 → XP_038359644.1  SURP and G-patch domain-containing protein 1

      Conserved Domains (2) summary
      smart00443
      Location:551 → 597
      G_patch; glycine rich nucleic binding domain
      pfam01805
      Location:181 → 232
      Surp; Surp module

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      44026542..44058007
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038630882.1 → XP_038486810.1  SURP and G-patch domain-containing protein 1

      Conserved Domains (2) summary
      smart00443
      Location:551 → 597
      G_patch; glycine rich nucleic binding domain
      pfam01805
      Location:181 → 232
      Surp; Surp module

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      44301796..44333296
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038566740.1 → XP_038422668.1  SURP and G-patch domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8C0KIB1, A0A8C0N357, A0A8C0N7X5, A0A8I3NUQ4, A0A8I3S0X7
      Conserved Domains (2) summary
      smart00443
      Location:551 → 597
      G_patch; glycine rich nucleic binding domain
      pfam01805
      Location:181 → 232
      Surp; Surp module

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      43808689..43840117
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_859900.6 → XP_864993.2  SURP and G-patch domain-containing protein 1

      UniProtKB/TrEMBL
      A0A8C0KIB1, A0A8C0N357, A0A8C0N7X5, A0A8I3NUQ4, A0A8I3S0X7
      Conserved Domains (2) summary
      smart00443
      Location:551 → 597
      G_patch; glycine rich nucleic binding domain
      pfam01805
      Location:181 → 232
      Surp; Surp module
    Nucleotide Protein
    Heading Accession and Version

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