U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ATP6V1C1 ATPase H+ transporting V1 subunit C1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 464326, updated on 29-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ATP6V1C1provided by VGNC
    Official Full Name
    ATPase H+ transporting V1 subunit C1provided by VGNC
    Primary source
    VGNC:VGNC:7587
    Locus tag
    CK820_G0002044
    See related
    Ensembl:ENSPTRG00000020486
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 8
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (113276637..113324884)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (117851912..117900142)

    Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene collagen alpha-1(I) chain-like Neighboring gene antizyme inhibitor 1 Neighboring gene uncharacterized LOC134810689 Neighboring gene uncharacterized LOC129135794 Neighboring gene uncharacterized LOC112204210 Neighboring gene BAALC binder of MAP3K1 and KLF4 Neighboring gene microRNA mir-3151

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables proton-transporting ATPase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lysosomal membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    V-type proton ATPase subunit C 1
    Names
    ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      113276637..113324884
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001155312.6 → XP_001155312.1  V-type proton ATPase subunit C 1

      See identical proteins and their annotated locations for XP_001155312.1

      UniProtKB/TrEMBL
      A0A2I3TNX8, A0A2J8PMR7, A0A6D2WYH4, H2RD64
      Related
      ENSPTRP00000090930.1
      Conserved Domains (2) summary
      cd14785
      Location:56 → 76
      V-ATPase_C; 3-helical coiled coil [structural motif]
      pfam03223
      Location:5 → 370
      V-ATPase_C; V-ATPase subunit C

    2. XM_009455756.5 → XP_009454031.1  V-type proton ATPase subunit C 1

      See identical proteins and their annotated locations for XP_009454031.1

      UniProtKB/TrEMBL
      A0A2I3TNX8, A0A2J8PMR7, A0A6D2WYH4, H2RD64
      Related
      ENSPTRP00000058391.1
      Conserved Domains (2) summary
      cd14785
      Location:56 → 76
      V-ATPase_C; 3-helical coiled coil [structural motif]
      pfam03223
      Location:5 → 370
      V-ATPase_C; V-ATPase subunit C
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous