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    JADE2 jade family PHD finger 2 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 462067, updated on 3-Apr-2024

    Summary

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    Official Symbol
    JADE2provided by VGNC
    Official Full Name
    jade family PHD finger 2provided by VGNC
    Primary source
    VGNC:VGNC:4055
    Locus tag
    CK820_G0026713
    See related
    Ensembl:ENSPTRG00000017242
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    PHF15
    Orthologs
    human mouse all
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    Genomic context

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    See JADE2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (132272999..132328452)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (132295018..132352224)

    Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein eS10-like Neighboring gene U6 spliceosomal RNA Neighboring gene U7 small nuclear RNA Neighboring gene ribosomal protein L31 pseudogene Neighboring gene secretion associated Ras related GTPase 1B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of histone acetyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein Jade-2; E3 ubiquitin-protein ligase Jade-2
    Names
    PHD finger protein 15

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      132272999..132328452
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016953848.4 → XP_016809337.2  E3 ubiquitin-protein ligase Jade-2 isoform X1

    2. XM_063811523.1 → XP_063667593.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

      UniProtKB/TrEMBL
      A0A2J8LRS7, A0A6D2XG17, H2QRI0, K7CJP9

    3. XM_063811524.1 → XP_063667594.1  E3 ubiquitin-protein ligase Jade-2 isoform X5

      UniProtKB/TrEMBL
      A0A2J8LRQ5, A0A803KKJ2, K7C834

    4. XM_063811521.1 → XP_063667591.1  E3 ubiquitin-protein ligase Jade-2 isoform X2

    5. XM_009449677.5 → XP_009447952.2  E3 ubiquitin-protein ligase Jade-2 isoform X6

      UniProtKB/TrEMBL
      A0A2I3T1P2, A0A2J8LRR1, A0A6D2XQY4
      Conserved Domains (4) summary
      COG5141
      Location:137 → 506
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      PRK07764
      Location:625 → 829
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd15705
      Location:254 → 364
      ePHD_JADE2; Extended PHD finger found in protein Jade-2 and similar proteins
      pfam10513
      Location:10 → 175
      EPL1; Enhancer of polycomb-like

    6. XM_054684613.2 → XP_054540588.1  E3 ubiquitin-protein ligase Jade-2 isoform X2

    7. XM_054684614.2 → XP_054540589.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

      UniProtKB/TrEMBL
      A0A2J8LRS7, A0A6D2XG17, H2QRI0, K7CJP9

    8. XM_063811531.1 → XP_063667601.1  E3 ubiquitin-protein ligase Jade-2 isoform X5

      UniProtKB/TrEMBL
      A0A2J8LRQ5, A0A803KKJ2, K7C834

    9. XM_063811526.1 → XP_063667596.1  E3 ubiquitin-protein ligase Jade-2 isoform X2

    10. XM_016953853.4 → XP_016809342.1  E3 ubiquitin-protein ligase Jade-2 isoform X6

      UniProtKB/TrEMBL
      A0A2I3T1P2, A0A2J8LRR1, A0A6D2XQY4
      Conserved Domains (4) summary
      COG5141
      Location:137 → 506
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      PRK07764
      Location:625 → 829
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd15705
      Location:254 → 364
      ePHD_JADE2; Extended PHD finger found in protein Jade-2 and similar proteins
      pfam10513
      Location:10 → 175
      EPL1; Enhancer of polycomb-like

    11. XM_063811530.1 → XP_063667600.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

      UniProtKB/TrEMBL
      A0A2J8LRS7, A0A6D2XG17, H2QRI0, K7CJP9

    12. XM_063811532.1 → XP_063667602.1  E3 ubiquitin-protein ligase Jade-2 isoform X5

      UniProtKB/TrEMBL
      A0A2J8LRQ5, A0A803KKJ2, K7C834

    13. XM_016953851.4 → XP_016809340.1  E3 ubiquitin-protein ligase Jade-2 isoform X6

      UniProtKB/TrEMBL
      A0A2I3T1P2, A0A2J8LRR1, A0A6D2XQY4
      Conserved Domains (4) summary
      COG5141
      Location:137 → 506
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      PRK07764
      Location:625 → 829
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd15705
      Location:254 → 364
      ePHD_JADE2; Extended PHD finger found in protein Jade-2 and similar proteins
      pfam10513
      Location:10 → 175
      EPL1; Enhancer of polycomb-like

    14. XM_063811529.1 → XP_063667599.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

      UniProtKB/TrEMBL
      A0A2J8LRS7, A0A6D2XG17, H2QRI0, K7CJP9

    15. XM_063811525.1 → XP_063667595.1  E3 ubiquitin-protein ligase Jade-2 isoform X2

    16. XM_016953857.4 → XP_016809346.1  E3 ubiquitin-protein ligase Jade-2 isoform X11

    17. XM_016953846.4 → XP_016809335.1  E3 ubiquitin-protein ligase Jade-2 isoform X6

      UniProtKB/TrEMBL
      A0A2I3T1P2, A0A2J8LRR1, A0A6D2XQY4
      Conserved Domains (4) summary
      COG5141
      Location:137 → 506
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      PRK07764
      Location:625 → 829
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd15705
      Location:254 → 364
      ePHD_JADE2; Extended PHD finger found in protein Jade-2 and similar proteins
      pfam10513
      Location:10 → 175
      EPL1; Enhancer of polycomb-like

    18. XM_054684611.2 → XP_054540586.1  E3 ubiquitin-protein ligase Jade-2 isoform X4

      UniProtKB/TrEMBL
      A0A2J8LRS7, A0A6D2XG17, H2QRI0, K7CJP9

    19. XM_016953850.4 → XP_016809339.1  E3 ubiquitin-protein ligase Jade-2 isoform X5

      UniProtKB/TrEMBL
      A0A2J8LRQ5, A0A803KKJ2, K7C834
      Conserved Domains (4) summary
      COG5141
      Location:137 → 530
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      PRK07764
      Location:581 → 785
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd15705
      Location:254 → 364
      ePHD_JADE2; Extended PHD finger found in protein Jade-2 and similar proteins
      pfam10513
      Location:10 → 175
      EPL1; Enhancer of polycomb-like

    20. XM_054684610.2 → XP_054540585.1  E3 ubiquitin-protein ligase Jade-2 isoform X2

    21. XM_016953852.4 → XP_016809341.1  E3 ubiquitin-protein ligase Jade-2 isoform X6

      UniProtKB/TrEMBL
      A0A2I3T1P2, A0A2J8LRR1, A0A6D2XQY4
      Conserved Domains (4) summary
      COG5141
      Location:137 → 506
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      PRK07764
      Location:625 → 829
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd15705
      Location:254 → 364
      ePHD_JADE2; Extended PHD finger found in protein Jade-2 and similar proteins
      pfam10513
      Location:10 → 175
      EPL1; Enhancer of polycomb-like

    22. XM_063811527.1 → XP_063667597.1  E3 ubiquitin-protein ligase Jade-2 isoform X2

    23. XM_063811522.1 → XP_063667592.1  E3 ubiquitin-protein ligase Jade-2 isoform X3

    24. XM_063811533.1 → XP_063667603.1  E3 ubiquitin-protein ligase Jade-2 isoform X9

    25. XM_063811534.1 → XP_063667604.1  E3 ubiquitin-protein ligase Jade-2 isoform X10

    26. XM_063811528.1 → XP_063667598.1  E3 ubiquitin-protein ligase Jade-2 isoform X8

    27. XM_016953854.4 → XP_016809343.1  E3 ubiquitin-protein ligase Jade-2 isoform X7

    Nucleotide Protein
    Heading Accession and Version

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