U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RGMB repulsive guidance molecule BMP co-receptor b [ Pan troglodytes (chimpanzee) ]

    Gene ID: 461966, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RGMBprovided by VGNC
    Official Full Name
    repulsive guidance molecule BMP co-receptor bprovided by VGNC
    Primary source
    VGNC:VGNC:4147
    Locus tag
    CK820_G0038232
    See related
    Ensembl:ENSPTRG00000017102
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RGMB in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (96446819..96473781)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (96512600..96540044)

    Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene C-terminal-binding protein 2-like Neighboring gene ATP-dependent RNA helicase DDX18-like Neighboring gene uncharacterized LOC107974787 Neighboring gene U6 spliceosomal RNA Neighboring gene chromodomain helicase DNA binding protein 1 Neighboring gene uncharacterized LOC134810090

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables coreceptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in BMP signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    RGM domain family member B; repulsive guidance molecule B
    Names
    RGM domain family, member B
    repulsive guidance molecule family member b

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      96446819..96473781
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016953549.4 → XP_016809038.1  repulsive guidance molecule B

      UniProtKB/TrEMBL
      A0A2I3SYT1, A0A2J8KJR5, A0A6D2YBJ9, K7DEQ7
      Related
      ENSPTRP00000082101.1
      Conserved Domains (2) summary
      pfam06534
      Location:267 → 441
      RGM_C; Repulsive guidance molecule (RGM) C-terminus
      pfam06535
      Location:95 → 262
      RGM_N; Repulsive guidance molecule (RGM) N-terminus

    2. XM_517848.9 → XP_517848.2  repulsive guidance molecule B

      See identical proteins and their annotated locations for XP_517848.2

      UniProtKB/TrEMBL
      A0A2I3SYT1, A0A2J8KJR5, A0A6D2YBJ9, K7DEQ7
      Conserved Domains (2) summary
      pfam06534
      Location:267 → 441
      RGM_C; Repulsive guidance molecule (RGM) C-terminus
      pfam06535
      Location:95 → 262
      RGM_N; Repulsive guidance molecule (RGM) N-terminus

    3. XM_063811432.1 → XP_063667502.1  repulsive guidance molecule B

      UniProtKB/TrEMBL
      A0A2I3SYT1, A0A2J8KJR5, A0A6D2YBJ9
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous