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    FLACC1 flagellum associated containing coiled-coil domains 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 459875, updated on 3-Apr-2024

    Summary

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    Official Symbol
    FLACC1provided by VGNC
    Official Full Name
    flagellum associated containing coiled-coil domains 1provided by VGNC
    Primary source
    VGNC:VGNC:67
    Locus tag
    CK820_G0014831
    See related
    Ensembl:ENSPTRG00000012803
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    ALS2CR12
    Orthologs
    human all
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    Genomic context

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    Location:
    chromosome: 2B
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 13 NC_072411.2 (103317261..103392670, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2B NC_072400.1 (103317136..103400295, complement)

    Chromosome 13 - NC_072411.2Genomic Context describing neighboring genes Neighboring gene CASP8 and FADD like apoptosis regulator Neighboring gene large ribosomal subunit protein eL38-like Neighboring gene caspase 10 Neighboring gene caspase 8 Neighboring gene trafficking kinesin protein 2 Neighboring gene SCYL2 pseudogene 1 Neighboring gene STE20 related adaptor beta

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    flagellum-associated coiled-coil domain-containing protein 1
    Names
    ALS2 chromosome region 12
    amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12
    amyotrophic lateral sclerosis 2 chromosomal region candidate gene 12 protein
    amyotrophic lateral sclerosis 2 chromosome region 12
    amyotrophic lateral sclerosis 2 chromosome region candidate 12

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001280196.1 → NP_001267125.1  flagellum-associated coiled-coil domain-containing protein 1

      See identical proteins and their annotated locations for NP_001267125.1

      Status: PROVISIONAL

      Source sequence(s)
      AK306984
      UniProtKB/TrEMBL
      A0A2I3RQ11, G2HJS0
      Related
      ENSPTRP00000066791.1, ENSPTRT00000106032.1
      Conserved Domains (1) summary
      TIGR02169
      Location:117 → 380
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072411.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      103317261..103392670 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016949342.4 → XP_016804831.1  flagellum-associated coiled-coil domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A2I3RQ11, A0A2J8N561, A0A6D2W4M2, H2R693
      Conserved Domains (1) summary
      cl25732
      Location:117 → 380
      SMC_N; RecF/RecN/SMC N terminal domain

    2. XM_009443699.5 → XP_009441974.1  flagellum-associated coiled-coil domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A2I3RQ11, A0A2J8N561, A0A6D2W4M2, H2R693
      Related
      ENSPTRP00000048872.4
      Conserved Domains (1) summary
      cl25732
      Location:117 → 380
      SMC_N; RecF/RecN/SMC N terminal domain

    3. XM_054678814.2 → XP_054534789.1  flagellum-associated coiled-coil domain-containing protein 1 isoform X2

    4. XM_009443701.5 → XP_009441976.1  flagellum-associated coiled-coil domain-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A2I3RQ11
      Conserved Domains (1) summary
      cl19764
      Location:227 → 349
      COG6; Conserved oligomeric complex COG6

    RNA

    1. XR_010149669.1 RNA Sequence

    2. XR_010149670.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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