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    VPS45 vacuolar protein sorting 45 homolog [ Pan troglodytes (chimpanzee) ]

    Gene ID: 457267, updated on 3-Apr-2024

    Summary

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    Official Symbol
    VPS45provided by VGNC
    Official Full Name
    vacuolar protein sorting 45 homologprovided by VGNC
    Primary source
    VGNC:VGNC:9908
    Locus tag
    CK820_G0046938
    See related
    Ensembl:ENSPTRG00000001246
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Also known as
    VPS45A
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (99076505..99154960, complement)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (132192235..132273235)

    Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134810431 Neighboring gene pleckstrin homology domain containing O1 Neighboring gene uncharacterized LOC129137599 Neighboring gene large ribosomal subunit protein eL6-like Neighboring gene OTU deubiquitinase 7B

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar protein sorting-associated protein 45
    Names
    vacuolar protein sorting 45A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      99076505..99154960 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_054670367.2 → XP_054526342.1  vacuolar protein sorting-associated protein 45 isoform X4

    2. XM_054670357.2 → XP_054526332.1  vacuolar protein sorting-associated protein 45 isoform X3

    3. XM_001167625.7 → XP_001167625.1  vacuolar protein sorting-associated protein 45 isoform X1

      See identical proteins and their annotated locations for XP_001167625.1

      UniProtKB/TrEMBL
      H2PZW0, K7DK07
      Related
      ENSPTRP00000002113.2
      Conserved Domains (1) summary
      pfam00995
      Location:23 → 539
      Sec1; Sec1 family

    4. XM_054670378.2 → XP_054526353.1  vacuolar protein sorting-associated protein 45 isoform X2

    5. XM_063814249.1 → XP_063670319.1  vacuolar protein sorting-associated protein 45 isoform X5

    6. XM_001167406.7 → XP_001167406.1  vacuolar protein sorting-associated protein 45 isoform X2

      UniProtKB/TrEMBL
      A0A2J8JIZ1
      Related
      ENSPTRP00000068954.1
      Conserved Domains (1) summary
      pfam00995
      Location:1 → 503
      Sec1; Sec1 family

    RNA

    1. XR_010158454.1 RNA Sequence

    2. XR_010158448.1 RNA Sequence

    3. XR_010158449.1 RNA Sequence

    4. XR_010158452.1 RNA Sequence

    5. XR_010158451.1 RNA Sequence

    6. XR_010158450.1 RNA Sequence

    7. XR_010158453.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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