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    tmem230 transmembrane protein 230 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 448661, updated on 5-Mar-2024

    Summary

    Official Symbol
    tmem230provided by Xenbase
    Official Full Name
    transmembrane protein 230provided by Xenbase
    Primary source
    Xenbase:XB-GENE-960971
    See related
    Ensembl:ENSXETG00000024909
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    c20orf30
    Orthologs
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    Genomic context

    Location:
    chromosome: 3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (123030119..123044374)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (111187854..111202109, complement)

    Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene CDP-diacylglycerol synthase 2 Neighboring gene proliferating cell nuclear antigen Neighboring gene solute carrier family 23 (ascorbic acid transporter), member 2 Neighboring gene Ras association domain family member 2

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC89669

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in autophagosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in early endosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in endosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in late endosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in recycling endosome IEA
    Inferred from Electronic Annotation
    more info
     
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
     
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
     
    located_in vesicle IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001005085.2NP_001005085.1  transmembrane protein 230

      See identical proteins and their annotated locations for NP_001005085.1

      Status: PROVISIONAL

      Source sequence(s)
      BC077009
      UniProtKB/TrEMBL
      F7BKY2, F7CZD4, Q28C04, Q6DET5
      Related
      ENSXETP00000053539.2, ENSXETT00000053539.4
      Conserved Domains (1) summary
      pfam05915
      Location:19118
      DUF872; Eukaryotic protein of unknown function (DUF872)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      123030119..123044374
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)