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    H1-1L H1.1L linker histone, cluster member [ Gallus gallus (chicken) ]

    Gene ID: 427892, updated on 19-Sep-2023

    Summary

    Official Symbol
    H1-1Lprovided by CGNC
    Official Full Name
    H1.1L linker histone, cluster memberprovided by CGNC
    Primary source
    CGNC:53220
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    HIST1H1C; HIST1H111L
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    Genomic context

    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (48209366..48210135)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (48498191..48507152)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene H1.01 linker histone, cluster member Neighboring gene H2B clustered histone 32 Neighboring gene H2A clustered histone 35 Neighboring gene H2A clustered histone 33 Neighboring gene H2B clustered histone 35

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables structural constituent of chromatin IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in nucleosome assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of nucleosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    histone H1.11L
    Names
    histone 1, H1c
    histone cluster 1, H1.11L (similar to human histone cluster 1, class H1 genes)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001040643.1NP_001035733.1  histone H1.11L

      See identical proteins and their annotated locations for NP_001035733.1

      Status: PROVISIONAL

      Source sequence(s)
      M17019
      UniProtKB/Swiss-Prot
      P08287
      Conserved Domains (1) summary
      pfam00538
      Location:43113
      Linker_histone; linker histone H1 and H5 family

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      48209366..48210135
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      48498191..48507152
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046908554.1XP_046764510.1  histone H1.11L isoform X1

    2. XM_046908555.1XP_046764511.1  histone H1.11L isoform X1

    3. XM_046908553.1XP_046764509.1  histone H1.11L isoform X1