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    PDCD1LG2 programmed cell death 1 ligand 2 [ Gallus gallus (chicken) ]

    Gene ID: 427225, updated on 3-Apr-2024

    Summary

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    Gene symbol
    PDCD1LG2
    Gene description
    programmed cell death 1 ligand 2
    See related
    Ensembl:ENSGALG00010013312
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: Z
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (28100797..28114350)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (28100797..28114350)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene relaxin 3 Neighboring gene CD274 molecule Neighboring gene uncharacterized LOC112530672 Neighboring gene microRNA 6669 Neighboring gene RIC1 homolog, RAB6A GEF complex partner 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Expression analysis of programmed death ligand 2 in tumors caused by the avian oncovirus Marek's disease virus. Matsuyama-Kato A, et al. Arch Virol, 2014 Aug. PMID 24623086

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Programmed cell death 1 ligand 2 has an immunoinhibitory function and is involved in the establishment of latency and tumor formation by Gallid herpesvirus 2.
      Title: Expression analysis of programmed death ligand 2 in tumors caused by the avian oncovirus Marek's disease virus.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in T cell costimulation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to lipopolysaccharide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of T cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    programmed cell death 1 ligand 1; programmed cell death 1 ligand 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      28100797..28114350
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_424812.8 → XP_424812.4  programmed cell death 1 ligand 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5P9G1, A0A8V0YJT0
      Conserved Domains (1) summary
      cl11960
      Location:157 → 243
      Ig; Immunoglobulin domain

    2. XM_004949067.5 → XP_004949124.1  programmed cell death 1 ligand 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YLP5
      Related
      ENSGALP00010018817.1, ENSGALT00010032026.1
      Conserved Domains (2) summary
      smart00410
      Location:29 → 141
      IG_like; Immunoglobulin like
      cl11960
      Location:38 → 142
      Ig; Immunoglobulin domain

    3. XM_004949069.5 → XP_004949126.1  programmed cell death 1 ligand 2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YLP5
      Conserved Domains (1) summary
      cl11960
      Location:30 → 100
      Ig; Immunoglobulin domain

    4. XM_025145071.3 → XP_025000839.1  programmed cell death 1 ligand 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5P9G1, A0A8V0YJT0
      Conserved Domains (1) summary
      cl11960
      Location:157 → 243
      Ig; Immunoglobulin domain

    5. XM_015280143.4 → XP_015135629.1  programmed cell death 1 ligand 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5P9G1, A0A8V0YJT0
      Related
      ENSGALP00010018828.1, ENSGALT00010032037.1
      Conserved Domains (1) summary
      cl11960
      Location:157 → 243
      Ig; Immunoglobulin domain

    6. XM_004949068.5 → XP_004949125.1  programmed cell death 1 ligand 1 isoform X3

      UniProtKB/TrEMBL
      A0A3Q2TTD9, A0A8V0YLP5
      Related
      ENSGALP00010018842.1, ENSGALT00010032052.1
      Conserved Domains (2) summary
      smart00410
      Location:15 → 127
      IG_like; Immunoglobulin like
      cl11960
      Location:24 → 128
      Ig; Immunoglobulin domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      28100797..28114350
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046935699.1 → XP_046791655.1  programmed cell death 1 ligand 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5P9G1

    2. XM_046935702.1 → XP_046791658.1  programmed cell death 1 ligand 1 isoform X2

    3. XM_046935704.1 → XP_046791660.1  programmed cell death 1 ligand 2 isoform X4

    4. XM_046935700.1 → XP_046791656.1  programmed cell death 1 ligand 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5P9G1

    5. XM_046935701.1 → XP_046791657.1  programmed cell death 1 ligand 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5P9G1

    6. XM_046935703.1 → XP_046791659.1  programmed cell death 1 ligand 1 isoform X3

      UniProtKB/TrEMBL
      A0A3Q2TTD9
    Nucleotide Protein
    Heading Accession and Version

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