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    CLNS1A chloride nucleotide-sensitive channel 1A [ Gallus gallus (chicken) ]

    Gene ID: 425500, updated on 3-Apr-2024

    Summary

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    Symbol
    CLNS1Aprovided by CGNC
    Full Name
    chloride nucleotide-sensitive channel 1Aprovided by CGNC
    Primary source
    CGNC:6506
    See related
    Ensembl:ENSGALG00010002065
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CLNS1A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (192873795..192883892)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (192943385..192953474)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 4 Neighboring gene adipogenesis associated, Mth938 domain containing Neighboring gene remodeling and spacing factor 1 Neighboring gene microRNA mir-12215 Neighboring gene uncharacterized LOC107055756 Neighboring gene aquaporin 11 Neighboring gene p21 (RAC1) activated kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell volume homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chloride transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mRNA cis splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spliceosomal snRNP assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of methylosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of pICln-Sm protein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of spliceosomal complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    methylosome subunit pICln
    Names
    chloride channel, nucleotide-sensitive, 1A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      192873795..192883892
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_423253.8 → XP_423253.5  methylosome subunit pICln

      UniProtKB/TrEMBL
      A0A8V0X4F1
      Related
      ENSGALP00010002815.1, ENSGALT00010004650.1
      Conserved Domains (1) summary
      cl17171
      Location:21 → 82
      PH-like; Pleckstrin homology-like domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      192943385..192953474
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046909396.1 → XP_046765352.1  methylosome subunit pICln

    Nucleotide Protein
    Heading Accession and Version

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