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    HOOK1 hook microtubule tethering protein 1 [ Gallus gallus (chicken) ]

    Gene ID: 424675, updated on 3-Apr-2024

    Summary

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    Symbol
    HOOK1provided by CGNC
    Full Name
    hook microtubule tethering protein 1provided by CGNC
    Primary source
    CGNC:52235
    See related
    Ensembl:ENSGALG00010026899
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 8
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (26324846..26350498)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (26338034..26363684)

    Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene FGGY carbohydrate kinase domain containing Neighboring gene uncharacterized LOC107054030 Neighboring gene Jun proto-oncogene, AP-1 transcription factor subunit Neighboring gene RING finger protein 170-like Neighboring gene uncharacterized LOC121111459 Neighboring gene cytochrome P450, family 2, subfamily J, polypeptide 24, pseudogene Neighboring gene cytochrome P450, family 2, subfamily J, polypeptide 23 Neighboring gene cytochrome P450, family 2, subfamily J, polypeptide 22

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables dynein light intermediate chain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cytoskeleton-dependent intracellular transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein Hook homolog 1
    Names
    hook homolog 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001006542.2 → NP_001006542.2  protein Hook homolog 1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000239
      UniProtKB/TrEMBL
      A0A8V1A6M3, A0A8V1AE26
      Related
      ENSGALP00010039746.1, ENSGALT00010065284.1
      Conserved Domains (2) summary
      COG1196
      Location:173 → 522
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam15921
      Location:359 → 645
      CCDC158; Coiled-coil domain-containing protein 158

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      26324846..26350498
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040704684.2 → XP_040560618.1  protein Hook homolog 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A1L0
      Related
      ENSGALP00010039744.1, ENSGALT00010065282.1
      Conserved Domains (2) summary
      COG1196
      Location:173 → 522
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam15921
      Location:359 → 645
      CCDC158; Coiled-coil domain-containing protein 158

    RNA

    1. XR_005861822.2 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      26338034..26363684
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046922852.1 → XP_046778808.1  protein Hook homolog 1 isoform X1

    RNA

    1. XR_006935410.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZJ27.1 GenPept UniProtKB/Swiss-Prot:Q5ZJ27

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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