BICC1 BicC family RNA binding protein 1 [Gallus gallus (chicken)] - Gene

Summary

Symbol: BICC1provided by CGNC
Full Name: BicC family RNA binding protein 1provided by CGNC
Primary source: CGNC:1302
See related: Ensembl:ENSGALG00010010226
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 6

Exon count:: 23

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	6	NC_052537.1 (1466354..1564290, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	6	NC_052578.1 (1334573..1432490, complement)

Chromosome 6 - NC_052537.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: protein bicaudal C homolog 1

Names: bicaudal C homolog 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001199507.2 → NP_001186436.1 protein bicaudal C homolog 1

Status: VALIDATED

Source sequence(s)

JAENSK010000227

UniProtKB/TrEMBL

A0A8V0YD17

Related

ENSGALP00010013845.1, ENSGALT00010024346.1

Conserved Domains (3) summary

cd09520
Location:877 → 940

SAM_BICC1; SAM domain of BICC1 (bicaudal) subfamily

smart00454
Location:880 → 937

SAM; Sterile alpha motif

cd02394
Location:138 → 204

vigilin_like_KH; K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

1466354..1564290 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046942779.1 → XP_046798735.1 protein bicaudal C homolog 1 isoform X1
XM_015287965.3 → XP_015143451.1 protein bicaudal C homolog 1 isoform X1

UniProtKB/TrEMBL

A0A3Q2TSS5

Conserved Domains (3) summary

cd09520
Location:751 → 814

SAM_BICC1; SAM domain of BICC1 (bicaudal) subfamily

smart00454
Location:754 → 811

SAM; Sterile alpha motif

cd02394
Location:12 → 78

vigilin_like_KH; K homology RNA-binding domain_vigilin_like. The vigilin family is a large and extended family of multiple KH-domain proteins, including vigilin, also called high density lipoprotein binding protien (HBP), fungal Scp160 and bicaudal-C. Yeast Scp160p has ...