U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    TSPAN17 tetraspanin 17 [ Gallus gallus (chicken) ]

    Gene ID: 422702, updated on 3-Apr-2024

    Summary

    Go to the top of the page Help
    Symbol
    TSPAN17provided by CGNC
    Full Name
    tetraspanin 17provided by CGNC
    Primary source
    CGNC:9287
    See related
    Ensembl:ENSGALG00010004522
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    TSPAN5
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 4
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (59299650..59381546, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (59300852..59382796, complement)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053277 Neighboring gene uncharacterized LOC107053275 Neighboring gene Rap1 GTPase-GDP dissociation stimulator 1 Neighboring gene uncharacterized LOC101748470 Neighboring gene uncharacterized LOC112532320 Neighboring gene eukaryotic translation initiation factor 4E

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in protein localization to plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein maturation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of vascular endothelial growth factor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tetraspanin-5
    Names
    tetraspanin 5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      59299650..59381546 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015285644.4 → XP_015141130.1  tetraspanin-5 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XK23
      Related
      ENSGALP00010006133.1, ENSGALT00010010540.1
      Conserved Domains (2) summary
      cd03159
      Location:113 → 233
      TM4SF9_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
      pfam00335
      Location:15 → 257
      Tetraspannin; Tetraspanin family

    2. XM_046940846.1 → XP_046796802.1  tetraspanin-5 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XHE8
      Related
      ENSGALP00010006130.1, ENSGALT00010010531.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      59300852..59382796 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040671176.2 → XP_040527110.1  tetraspanin-5 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XK23
      Conserved Domains (2) summary
      cd03159
      Location:113 → 233
      TM4SF9_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
      pfam00335
      Location:15 → 257
      Tetraspannin; Tetraspanin family

    2. XM_046917099.1 → XP_046773055.1  tetraspanin-5 isoform X2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous