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    RUFY3 RUN and FYVE domain containing 3 [ Gallus gallus (chicken) ]

    Gene ID: 422645, updated on 3-Apr-2024

    Summary

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    Symbol
    RUFY3provided by CGNC
    Full Name
    RUN and FYVE domain containing 3provided by CGNC
    Primary source
    CGNC:8788
    See related
    Ensembl:ENSGALG00010004237
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See RUFY3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    30
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (49525548..49584116)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (49529682..49588230)

    Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112532331 Neighboring gene SDA1 domain containing 1 Neighboring gene uncharacterized LOC422643 Neighboring gene joining chain of multimeric IgA and IgM Neighboring gene UTP3, small subunit processome component homolog (S. cerevisiae) Neighboring gene G-rich RNA sequence binding factor 1 Neighboring gene microRNA 1751 Neighboring gene MOB kinase activator 1A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of axonogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein RUFY3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      49525548..49584116
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046940818.1 → XP_046796774.1  protein RUFY3 isoform X3

    2. XM_046940819.1 → XP_046796775.1  protein RUFY3 isoform X3

    3. XM_046940816.1 → XP_046796772.1  protein RUFY3 isoform X3

    4. XM_015276412.4 → XP_015131898.1  protein RUFY3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XGE9, A0A8V0XNK5
      Related
      ENSGALP00010005793.1, ENSGALT00010009910.1
      Conserved Domains (4) summary
      COG1196
      Location:298 → 537
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      PRK06995
      Location:4 → 128
      flhF; flagellar biosynthesis protein FlhF
      cd15744
      Location:610 → 659
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:143 → 264
      RUN; RUN domain

    5. XM_015276413.4 → XP_015131899.1  protein RUFY3 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XGE9
      Conserved Domains (4) summary
      COG1196
      Location:298 → 537
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      PRK06995
      Location:4 → 128
      flhF; flagellar biosynthesis protein FlhF
      cd15744
      Location:606 → 655
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:143 → 264
      RUN; RUN domain

    6. XM_015276415.4 → XP_015131901.1  protein RUFY3 isoform X5

      UniProtKB/TrEMBL
      A0A8V0XGE9
      Conserved Domains (4) summary
      PRK06995
      Location:4 → 128
      flhF; flagellar biosynthesis protein FlhF
      TIGR02168
      Location:283 → 500
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:570 → 619
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:143 → 264
      RUN; RUN domain

    7. XM_040699739.2 → XP_040555673.1  protein RUFY3 isoform X10

      UniProtKB/TrEMBL
      A0A3Q3A883
      Related
      ENSGALP00010005788.1, ENSGALT00010009905.1
      Conserved Domains (3) summary
      smart00593
      Location:203 → 265
      RUN; domain involved in Ras-like GTPase signaling
      PRK06995
      Location:4 → 128
      flhF; flagellar biosynthesis protein FlhF
      TIGR02168
      Location:283 → 485
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    8. XM_015276414.4 → XP_015131900.1  protein RUFY3 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XGF3
      Conserved Domains (3) summary
      COG1196
      Location:276 → 515
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd15744
      Location:588 → 637
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:121 → 242
      RUN; RUN domain

    9. XM_046940817.1 → XP_046796773.1  protein RUFY3 isoform X3

    10. XM_420599.8 → XP_420599.3  protein RUFY3 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XCD3, A0A8V0XGF3
      Related
      ENSGALP00010005792.1, ENSGALT00010009909.1
      Conserved Domains (3) summary
      COG1196
      Location:258 → 497
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd15744
      Location:570 → 619
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:103 → 224
      RUN; RUN domain

    11. XM_040699735.2 → XP_040555669.1  protein RUFY3 isoform X6

      UniProtKB/TrEMBL
      A0A8V0XGF3
      Conserved Domains (3) summary
      smart00593
      Location:163 → 225
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:272 → 576
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:566 → 615
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    12. XM_040699740.2 → XP_040555674.1  protein RUFY3 isoform X12

      UniProtKB/TrEMBL
      A0A3Q3A883, A0A8V0XGE5
      Related
      ENSGALP00010005781.1, ENSGALT00010009898.1
      Conserved Domains (2) summary
      COG1196
      Location:258 → 467
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:103 → 224
      RUN; RUN domain

    13. XM_046940820.1 → XP_046796776.1  protein RUFY3 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XCD3

    14. XM_040699734.2 → XP_040555668.1  protein RUFY3 isoform X6

      UniProtKB/TrEMBL
      A0A8V0XGF3
      Related
      ENSGALP00010005791.1, ENSGALT00010009908.1
      Conserved Domains (3) summary
      smart00593
      Location:163 → 225
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:272 → 576
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:566 → 615
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    15. XM_046940823.1 → XP_046796779.1  protein RUFY3 isoform X9

    16. XM_046940825.1 → XP_046796781.1  protein RUFY3 isoform X9

    17. XM_015276417.4 → XP_015131903.1  protein RUFY3 isoform X11

      UniProtKB/TrEMBL
      A0A3Q3A883
      Conserved Domains (2) summary
      COG1196
      Location:276 → 485
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:121 → 242
      RUN; RUN domain

    18. XM_004941179.5 → XP_004941236.1  protein RUFY3 isoform X12

      UniProtKB/TrEMBL
      A0A3Q3A883, A0A8V0XGE5
      Conserved Domains (2) summary
      COG1196
      Location:258 → 467
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:103 → 224
      RUN; RUN domain

    19. XM_040699736.2 → XP_040555670.1  protein RUFY3 isoform X8

      UniProtKB/TrEMBL
      A0A8V0XGE9
      Related
      ENSGALP00010005786.1, ENSGALT00010009903.1
      Conserved Domains (3) summary
      smart00593
      Location:115 → 177
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:224 → 532
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:522 → 571
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    20. XM_040699738.2 → XP_040555672.1  protein RUFY3 isoform X9

      UniProtKB/TrEMBL
      A0A8V0XGE9
      Conserved Domains (3) summary
      smart00593
      Location:99 → 161
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:208 → 516
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:506 → 555
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    21. XM_040699737.2 → XP_040555671.1  protein RUFY3 isoform X9

      UniProtKB/TrEMBL
      A0A8V0XGE9
      Conserved Domains (3) summary
      smart00593
      Location:99 → 161
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:208 → 516
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:506 → 555
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    22. XM_046940824.1 → XP_046796780.1  protein RUFY3 isoform X9

    23. XM_046940826.1 → XP_046796782.1  protein RUFY3 isoform X9

    24. XM_046940821.1 → XP_046796777.1  protein RUFY3 isoform X9

    25. XM_015276416.3 → XP_015131902.2  protein RUFY3 isoform X7

      Related
      ENSGALP00010005777.1, ENSGALT00010009894.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      49529682..49588230
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046917061.1 → XP_046773017.1  protein RUFY3 isoform X3

    2. XM_046917062.1 → XP_046773018.1  protein RUFY3 isoform X3

    3. XM_046917059.1 → XP_046773015.1  protein RUFY3 isoform X3

    4. XM_040670877.2 → XP_040526811.1  protein RUFY3 isoform X1

      UniProtKB/TrEMBL
      A0A8V0XGE9, A0A8V0XNK5
      Conserved Domains (4) summary
      COG1196
      Location:298 → 537
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      PRK06995
      Location:4 → 128
      flhF; flagellar biosynthesis protein FlhF
      cd15744
      Location:610 → 659
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:143 → 264
      RUN; RUN domain

    5. XM_040670878.2 → XP_040526812.1  protein RUFY3 isoform X2

      UniProtKB/TrEMBL
      A0A8V0XGE9
      Conserved Domains (4) summary
      COG1196
      Location:298 → 537
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      PRK06995
      Location:4 → 128
      flhF; flagellar biosynthesis protein FlhF
      cd15744
      Location:606 → 655
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:143 → 264
      RUN; RUN domain

    6. XM_040670882.2 → XP_040526816.1  protein RUFY3 isoform X5

      UniProtKB/TrEMBL
      A0A8V0XGE9
      Conserved Domains (4) summary
      PRK06995
      Location:4 → 128
      flhF; flagellar biosynthesis protein FlhF
      TIGR02168
      Location:283 → 500
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      cd15744
      Location:570 → 619
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:143 → 264
      RUN; RUN domain

    7. XM_040670889.2 → XP_040526823.1  protein RUFY3 isoform X10

      UniProtKB/TrEMBL
      A0A3Q3A883
      Conserved Domains (3) summary
      smart00593
      Location:203 → 265
      RUN; domain involved in Ras-like GTPase signaling
      PRK06995
      Location:4 → 128
      flhF; flagellar biosynthesis protein FlhF
      TIGR02168
      Location:283 → 485
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    8. XM_040670879.2 → XP_040526813.1  protein RUFY3 isoform X3

      UniProtKB/TrEMBL
      A0A8V0XGF3
      Conserved Domains (3) summary
      COG1196
      Location:276 → 515
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd15744
      Location:588 → 637
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:121 → 242
      RUN; RUN domain

    9. XM_046917060.1 → XP_046773016.1  protein RUFY3 isoform X3

    10. XM_040670880.2 → XP_040526814.1  protein RUFY3 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XCD3, A0A8V0XGF3
      Conserved Domains (3) summary
      COG1196
      Location:258 → 497
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      cd15744
      Location:570 → 619
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins
      pfam02759
      Location:103 → 224
      RUN; RUN domain

    11. XM_040670884.2 → XP_040526818.1  protein RUFY3 isoform X6

      UniProtKB/TrEMBL
      A0A8V0XGF3
      Conserved Domains (3) summary
      smart00593
      Location:163 → 225
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:272 → 576
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:566 → 615
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    12. XM_040670892.2 → XP_040526826.1  protein RUFY3 isoform X12

      UniProtKB/TrEMBL
      A0A3Q3A883, A0A8V0XGE5
      Conserved Domains (2) summary
      COG1196
      Location:258 → 467
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:103 → 224
      RUN; RUN domain

    13. XM_046917063.1 → XP_046773019.1  protein RUFY3 isoform X4

      UniProtKB/TrEMBL
      A0A8V0XCD3

    14. XM_040670883.2 → XP_040526817.1  protein RUFY3 isoform X6

      UniProtKB/TrEMBL
      A0A8V0XGF3
      Conserved Domains (3) summary
      smart00593
      Location:163 → 225
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:272 → 576
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:566 → 615
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    15. XM_046917066.1 → XP_046773022.1  protein RUFY3 isoform X9

    16. XM_046917069.1 → XP_046773025.1  protein RUFY3 isoform X9

    17. XM_040670890.2 → XP_040526824.1  protein RUFY3 isoform X11

      UniProtKB/TrEMBL
      A0A3Q3A883
      Conserved Domains (2) summary
      COG1196
      Location:276 → 485
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:121 → 242
      RUN; RUN domain

    18. XM_040670891.2 → XP_040526825.1  protein RUFY3 isoform X12

      UniProtKB/TrEMBL
      A0A3Q3A883, A0A8V0XGE5
      Conserved Domains (2) summary
      COG1196
      Location:258 → 467
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam02759
      Location:103 → 224
      RUN; RUN domain

    19. XM_040670886.2 → XP_040526820.1  protein RUFY3 isoform X8

      UniProtKB/TrEMBL
      A0A8V0XGE9
      Conserved Domains (3) summary
      smart00593
      Location:115 → 177
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:224 → 532
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:522 → 571
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    20. XM_040670888.2 → XP_040526822.1  protein RUFY3 isoform X9

      UniProtKB/TrEMBL
      A0A8V0XGE9
      Conserved Domains (3) summary
      smart00593
      Location:99 → 161
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:208 → 516
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:506 → 555
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    21. XM_040670887.2 → XP_040526821.1  protein RUFY3 isoform X9

      UniProtKB/TrEMBL
      A0A8V0XGE9
      Conserved Domains (3) summary
      smart00593
      Location:99 → 161
      RUN; domain involved in Ras-like GTPase signaling
      TIGR02169
      Location:208 → 516
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd15744
      Location:506 → 555
      FYVE_RUFY3; FYVE-related domain found in RUN and FYVE domain-containing protein 3 (RUFY3) and similar proteins

    22. XM_046917067.1 → XP_046773023.1  protein RUFY3 isoform X9

    23. XM_046917070.1 → XP_046773026.1  protein RUFY3 isoform X9

    24. XM_046917065.1 → XP_046773021.1  protein RUFY3 isoform X9

    25. XM_040670885.2 → XP_040526819.2  protein RUFY3 isoform X7

    Nucleotide Protein Strain
    Heading Accession and Version

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