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    RIN2 Ras and Rab interactor 2 [ Gallus gallus (chicken) ]

    Gene ID: 421246, updated on 3-Apr-2024

    Summary

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    Symbol
    RIN2provided by CGNC
    Full Name
    Ras and Rab interactor 2provided by CGNC
    Primary source
    CGNC:6413
    See related
    Ensembl:ENSGALG00010018351
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (4300573..4363086)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (4226262..4286421)

    Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101750021 Neighboring gene solute carrier family 24 member 3 Neighboring gene uncharacterized LOC121113168 Neighboring gene phosphorylase, glycogen; brain Neighboring gene abhydrolase domain containing 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables guanyl-nucleotide exchange factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras and Rab interactor 2
    Names
    RAB5 interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4300573..4363086
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004940160.5 → XP_004940217.2  ras and Rab interactor 2 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YZC8, A0A8V0ZCX2
      Related
      ENSGALP00010026361.1, ENSGALT00010044308.1
      Conserved Domains (3) summary
      smart00167
      Location:750 → 868
      VPS9; Domain present in VPS9
      cd10394
      Location:187 → 286
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:889 → 979
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    2. XM_004940159.5 → XP_004940216.4  ras and Rab interactor 2 isoform X1

      Related
      ENSGALP00010026367.1, ENSGALT00010044314.1

    3. XM_040697767.2 → XP_040553701.1  ras and Rab interactor 2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YZB6, A0A8V0ZCV0
      Related
      ENSGALP00010026347.1, ENSGALT00010044289.1
      Conserved Domains (3) summary
      smart00167
      Location:613 → 731
      VPS9; Domain present in VPS9
      cd10394
      Location:50 → 149
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:752 → 842
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    4. XM_015283395.4 → XP_015138881.2  ras and Rab interactor 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZCW2
      Related
      ENSGALP00010026365.1, ENSGALT00010044312.1
      Conserved Domains (3) summary
      smart00167
      Location:647 → 765
      VPS9; Domain present in VPS9
      cd10394
      Location:84 → 183
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:786 → 876
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    5. XM_040697766.2 → XP_040553700.2  ras and Rab interactor 2 isoform X3

    6. XM_046939342.1 → XP_046795298.1  ras and Rab interactor 2 isoform X1

    7. XM_046939343.1 → XP_046795299.1  ras and Rab interactor 2 isoform X1

    8. XM_015283396.4 → XP_015138882.2  ras and Rab interactor 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZCW2
      Conserved Domains (3) summary
      smart00167
      Location:647 → 765
      VPS9; Domain present in VPS9
      cd10394
      Location:84 → 183
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:786 → 876
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    9. XM_040697768.2 → XP_040553702.1  ras and Rab interactor 2 isoform X6

      UniProtKB/TrEMBL
      A0A8V0YZB6
      Related
      ENSGALP00010026351.1, ENSGALT00010044295.1
      Conserved Domains (3) summary
      smart00167
      Location:592 → 710
      VPS9; Domain present in VPS9
      cd10394
      Location:29 → 128
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:731 → 821
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    10. XM_046939344.1 → XP_046795300.1  ras and Rab interactor 2 isoform X5

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      4226262..4286421
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040667049.2 → XP_040522983.1  ras and Rab interactor 2 isoform X6

      UniProtKB/TrEMBL
      A0A8V0YZB6
      Conserved Domains (3) summary
      smart00167
      Location:592 → 710
      VPS9; Domain present in VPS9
      cd10394
      Location:29 → 128
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:731 → 821
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    2. XM_046914841.1 → XP_046770797.1  ras and Rab interactor 2 isoform X4

    3. XM_046914844.1 → XP_046770800.1  ras and Rab interactor 2 isoform X5

    4. XM_046914839.1 → XP_046770795.1  ras and Rab interactor 2 isoform X1

    5. XM_046914843.1 → XP_046770799.1  ras and Rab interactor 2 isoform X4

    6. XM_046914840.1 → XP_046770796.1  ras and Rab interactor 2 isoform X1

    7. XM_046914842.1 → XP_046770798.1  ras and Rab interactor 2 isoform X4

    8. XM_040667046.2 → XP_040522980.1  ras and Rab interactor 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZCW2
      Conserved Domains (3) summary
      smart00167
      Location:647 → 765
      VPS9; Domain present in VPS9
      cd10394
      Location:84 → 183
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:786 → 876
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    9. XM_040667043.2 → XP_040522977.1  ras and Rab interactor 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZCW2
      Conserved Domains (3) summary
      smart00167
      Location:647 → 765
      VPS9; Domain present in VPS9
      cd10394
      Location:84 → 183
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:786 → 876
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    10. XM_046914846.1 → XP_046770802.1  ras and Rab interactor 2 isoform X6

    11. XM_040667047.2 → XP_040522981.1  ras and Rab interactor 2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YZB6
      Conserved Domains (3) summary
      smart00167
      Location:613 → 731
      VPS9; Domain present in VPS9
      cd10394
      Location:50 → 149
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:752 → 842
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    12. XM_040667048.2 → XP_040522982.1  ras and Rab interactor 2 isoform X4

      UniProtKB/TrEMBL
      A0A8V0YZB6
      Conserved Domains (3) summary
      smart00167
      Location:613 → 731
      VPS9; Domain present in VPS9
      cd10394
      Location:50 → 149
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:752 → 842
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    13. XM_040667045.2 → XP_040522979.1  ras and Rab interactor 2 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZCW2
      Conserved Domains (3) summary
      smart00167
      Location:647 → 765
      VPS9; Domain present in VPS9
      cd10394
      Location:84 → 183
      SH2_RIN2; Src homology 2 (SH2) domain found in Ras and Rab interactor 2 (RIN2)-like proteins
      cd16131
      Location:786 → 876
      RA_Rin2; Ras-associating (RA) domain found in Ras and Rab interactor 2 (Rin2)

    14. XM_046914845.1 → XP_046770801.1  ras and Rab interactor 2 isoform X5

    Nucleotide Protein Strain
    Heading Accession and Version

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