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    LSM10 LSM10, U7 small nuclear RNA associated [ Gallus gallus (chicken) ]

    Gene ID: 419621, updated on 5-Mar-2024

    Summary

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    Symbol
    LSM10provided by CGNC
    Full Name
    LSM10, U7 small nuclear RNA associatedprovided by CGNC
    Primary source
    CGNC:1517
    See related
    Ensembl:ENSGALG00010014745
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 23
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (4397591..4398661)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (4161266..4162367)

    Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S15 Neighboring gene organic solute carrier partner 1 Neighboring gene serine/threonine kinase 40 Neighboring gene eva-1 homolog B Neighboring gene thyroid hormone receptor associated protein 3 Neighboring gene MAP7 domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables U7 snRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone pre-mRNA DCP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA 3'-end processing by stem-loop binding and cleavage IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytoplasmic U snRNP body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    U7 snRNA-associated Sm-like protein LSm10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4397591..4398661
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_417768.7 → XP_417768.1  U7 snRNA-associated Sm-like protein LSm10

      See identical proteins and their annotated locations for XP_417768.1

      UniProtKB/TrEMBL
      E1BY33
      Related
      ENSGALP00010020614.1, ENSGALT00010035419.1
      Conserved Domains (1) summary
      cd01733
      Location:8 → 85
      LSm10; Like-Sm protein 10

    2. XM_004947764.5 → XP_004947821.1  U7 snRNA-associated Sm-like protein LSm10

      See identical proteins and their annotated locations for XP_004947821.1

      UniProtKB/TrEMBL
      E1BY33
      Conserved Domains (1) summary
      cd01733
      Location:8 → 85
      LSm10; Like-Sm protein 10

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      4161266..4162367
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040689742.2 → XP_040545676.1  U7 snRNA-associated Sm-like protein LSm10

      UniProtKB/TrEMBL
      E1BY33
      Conserved Domains (1) summary
      cd01733
      Location:8 → 85
      LSm10; Like-Sm protein 10

    2. XM_040689743.2 → XP_040545677.1  U7 snRNA-associated Sm-like protein LSm10

      UniProtKB/TrEMBL
      E1BY33
      Conserved Domains (1) summary
      cd01733
      Location:8 → 85
      LSm10; Like-Sm protein 10
    Nucleotide Protein
    Heading Accession and Version

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