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    SRSF4 serine and arginine rich splicing factor 4 [ Gallus gallus (chicken) ]

    Gene ID: 419600, updated on 5-Mar-2024

    Summary

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    Symbol
    SRSF4provided by CGNC
    Full Name
    serine and arginine rich splicing factor 4provided by CGNC
    Primary source
    CGNC:968
    See related
    Ensembl:ENSGALG00010016299
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    SFRS4
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 23
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 23 NC_052554.1 (3100202..3110098, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 23 NC_052595.1 (2866955..2876847, complement)

    Chromosome 23 - NC_052554.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 200B Neighboring gene uncharacterized LOC124417371 Neighboring gene l(3)mbt-like 4 (Drosophila) Neighboring gene mitochondrial trans-2-enoyl-CoA reductase Neighboring gene microRNA 1724 Neighboring gene protein tyrosine phosphatase, receptor type U

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in alternative mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mRNA splice site recognition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/arginine-rich splicing factor 4
    Names
    splicing factor, arginine/serine-rich 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052554.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      3100202..3110098 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015297750.3 → XP_015153236.1  serine/arginine-rich splicing factor 4 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2UIV1
      Related
      ENSGALP00010022622.1, ENSGALT00010039191.1
      Conserved Domains (4) summary
      TIGR01622
      Location:250 → 344
      SF-CC1; splicing factor, CC1-like family
      TIGR01642
      Location:281 → 420
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      cd12337
      Location:3 → 72
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:104 → 175
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins

    2. XM_046903673.1 → XP_046759629.1  serine/arginine-rich splicing factor 4 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YX36
      Related
      ENSGALP00010022615.1, ENSGALT00010039179.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052595.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2866955..2876847 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040690170.2 → XP_040546104.1  serine/arginine-rich splicing factor 4 isoform X1

      UniProtKB/TrEMBL
      A0A3Q2UIV1
      Conserved Domains (4) summary
      TIGR01622
      Location:250 → 344
      SF-CC1; splicing factor, CC1-like family
      TIGR01642
      Location:281 → 420
      U2AF_lg; U2 snRNP auxilliary factor, large subunit, splicing factor
      cd12337
      Location:3 → 72
      RRM1_SRSF4_like; RNA recognition motif 1 (RRM1) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
      cd12600
      Location:104 → 175
      RRM2_SRSF4_like; RNA recognition motif 2 (RRM2) found in serine/arginine-rich splicing factor 4 (SRSF4) and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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