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    FBXO42 F-box protein 42 [ Gallus gallus (chicken) ]

    Gene ID: 419461, updated on 3-Apr-2024

    Summary

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    Symbol
    FBXO42provided by CGNC
    Full Name
    F-box protein 42provided by CGNC
    Primary source
    CGNC:2725
    See related
    Ensembl:ENSGALG00010020283
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 21
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 21 NC_052552.1 (4327823..4367288, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 21 NC_052593.1 (4360953..4400379, complement)

    Chromosome 21 - NC_052552.1Genomic Context describing neighboring genes Neighboring gene EPH receptor A2 Neighboring gene REM2 and RAB like small GTPase 1 Neighboring gene SUZ RNA binding domain containing 1 Neighboring gene NECAP endocytosis associated 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    F-box only protein 42

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052552.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      4327823..4367288 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_417619.8 → XP_417619.6  F-box only protein 42 isoform X1

      Related
      ENSGALP00010028927.1, ENSGALT00010048944.1

    2. XM_015297026.4 → XP_015152512.2  F-box only protein 42 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZDH5, A0A8V0ZDH9
      Related
      ENSGALP00010028922.1, ENSGALT00010048935.1
      Conserved Domains (5) summary
      smart00256
      Location:78 → 111
      FBOX; A Receptor for Ubiquitination Targets
      PLN02772
      Location:256 → 343
      PLN02772; guanylate kinase
      PHA03307
      Location:390 → 635
      PHA03307; transcriptional regulator ICP4; Provisional
      TIGR03547
      Location:177 → 277
      muta_rot_YjhT; mutatrotase, YjhT family
      sd00038
      Location:147 → 196
      Kelch; KELCH repeat [structural motif]

    3. XM_046903275.1 → XP_046759231.1  F-box only protein 42 isoform X3

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052593.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      4360953..4400379 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040689192.2 → XP_040545126.2  F-box only protein 42 isoform X1

    2. XM_040689193.2 → XP_040545127.1  F-box only protein 42 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZDH9
      Conserved Domains (5) summary
      smart00256
      Location:78 → 111
      FBOX; A Receptor for Ubiquitination Targets
      PLN02772
      Location:256 → 343
      PLN02772; guanylate kinase
      PHA03307
      Location:384 → 643
      PHA03307; transcriptional regulator ICP4; Provisional
      TIGR03547
      Location:177 → 277
      muta_rot_YjhT; mutatrotase, YjhT family
      sd00038
      Location:147 → 196
      Kelch; KELCH repeat [structural motif]

    3. XM_046931382.1 → XP_046787338.1  F-box only protein 42 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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