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    CHODL chondrolectin [ Gallus gallus (chicken) ]

    Gene ID: 418474, updated on 5-Mar-2024

    Summary

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    Official Symbol
    CHODLprovided by CGNC
    Official Full Name
    chondrolectinprovided by CGNC
    Primary source
    CGNC:11725
    See related
    Ensembl:ENSGALG00010007467
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (99674234..99703415)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (99716917..99745938)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene C21orf91 homolog Neighboring gene uncharacterized LOC107055161 Neighboring gene uncharacterized LOC121109215 Neighboring gene transmembrane protease, serine 15 Neighboring gene uncharacterized LOC107055163

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of axonogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chondrolectin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      99674234..99703415
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004938355.5 → XP_004938412.2  chondrolectin isoform X2

      UniProtKB/TrEMBL
      A0A8V0XT07, A0A8V0Y0S5
      Related
      ENSGALP00010009827.1, ENSGALT00010017809.1
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    2. XM_416682.8 → XP_416682.3  chondrolectin isoform X1

      UniProtKB/TrEMBL
      A0A8V0XUZ7, A0A8V0Y0T0
      Related
      ENSGALP00010009825.1, ENSGALT00010017803.1
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    3. XM_004938357.5 → XP_004938414.2  chondrolectin isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y0S5
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    4. XM_004938358.5 → XP_004938415.2  chondrolectin isoform X5

      UniProtKB/TrEMBL
      A0A8V0Y0T0
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    5. XM_001231434.7 → XP_001231435.2  chondrolectin isoform X4

      UniProtKB/TrEMBL
      A0A8V0Y0T0
      Related
      ENSGALP00010009829.1, ENSGALT00010017817.1
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    6. XM_004938359.5 → XP_004938416.2  chondrolectin isoform X6

      UniProtKB/TrEMBL
      A0A8V0XXR6
      Related
      ENSGALP00010009826.1, ENSGALT00010017806.1
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    7. XM_004938360.5 → XP_004938417.2  chondrolectin isoform X7

      UniProtKB/TrEMBL
      A0A8V0Y0S5
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    8. XM_040670797.2 → XP_040526731.1  chondrolectin isoform X8

      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    9. XM_040670787.2 → XP_040526721.1  chondrolectin isoform X7

      UniProtKB/TrEMBL
      A0A8V0Y0S5
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      99716917..99745938
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040659529.2 → XP_040515463.1  chondrolectin isoform X2

      UniProtKB/TrEMBL
      A0A8V0Y0S5
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    2. XM_040659528.2 → XP_040515462.1  chondrolectin isoform X1

      UniProtKB/TrEMBL
      A0A8V0Y0T0
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    3. XM_040659530.2 → XP_040515464.1  chondrolectin isoform X3

      UniProtKB/TrEMBL
      A0A8V0Y0S5
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    4. XM_040659532.2 → XP_040515466.1  chondrolectin isoform X5

      UniProtKB/TrEMBL
      A0A8V0Y0T0
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    5. XM_040659531.2 → XP_040515465.1  chondrolectin isoform X4

      UniProtKB/TrEMBL
      A0A8V0Y0T0
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    6. XM_040659533.2 → XP_040515467.1  chondrolectin isoform X6

      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    7. XM_040659534.2 → XP_040515468.1  chondrolectin isoform X7

      UniProtKB/TrEMBL
      A0A8V0Y0S5
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    8. XM_040659536.2 → XP_040515470.1  chondrolectin isoform X8

      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin

    9. XM_040659535.2 → XP_040515469.1  chondrolectin isoform X7

      UniProtKB/TrEMBL
      A0A8V0Y0S5
      Conserved Domains (1) summary
      cd03595
      Location:30 → 183
      CLECT_chondrolectin_like; C-type lectin-like domain (CTLD) of the type found in the human type-1A transmembrane proteins chondrolectin (CHODL) and layilin
    Nucleotide Protein Strain
    Heading Accession and Version

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