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    sars1 seryl-tRNA synthetase 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 407933, updated on 5-Mar-2024

    Summary

    Official Symbol
    sars1provided by Xenbase
    Official Full Name
    seryl-tRNA synthetase 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-969040
    See related
    Ensembl:ENSXETG00000008009
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    sars
    Orthologs
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    Genomic context

    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (74482747..74500578, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (48657390..48674649, complement)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene endosome-lysosome associated apoptosis and autophagy regulator 1 Neighboring gene cilia and flagella associated protein 276

    Genomic regions, transcripts, and products

    General gene information

    Clone Names

    • MGC69290

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables aminoacyl-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables serine-tRNA ligase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within seryl-tRNA aminoacylation IEA
    Inferred from Electronic Annotation
    more info
     
    acts_upstream_of_or_within tRNA aminoacylation for protein translation IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    serine--tRNA ligase, cytoplasmic
    Names
    seryl-aminoacyl-tRNA synthetase 1
    NP_998852.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_213687.2NP_998852.1  serine--tRNA ligase, cytoplasmic

      See identical proteins and their annotated locations for NP_998852.1

      Status: PROVISIONAL

      Source sequence(s)
      CR762292
      UniProtKB/TrEMBL
      A0A6I8S351, Q6NVT3
      Related
      ENSXETP00000087741.2, ENSXETT00000068113.2
      Conserved Domains (1) summary
      PLN02678
      Location:3474
      PLN02678; seryl-tRNA synthetase

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      74482747..74500578 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)