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    krt19 keratin 19 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 394514, updated on 11-Nov-2023

    Summary

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    Official Symbol
    krt19provided by Xenbase
    Official Full Name
    keratin 19provided by Xenbase
    Primary source
    Xenbase:XB-GENE-490360
    See related
    Ensembl:ENSXETG00000012482
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    k19; ck19; k1cs; krt9; krt15
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    Genomic context

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    See krt19 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (7700709..7712432)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (1727284..1738294, complement)

    Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene keratin 9, gene 1 Neighboring gene keratin 9, gene 2 Neighboring gene keratin 15, gene 1 Neighboring gene keratin 15, type I gene 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC76282

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables structural molecule activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in intermediate filament IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    keratin 19
    Names
    cytokeratin 19
    keratin 19, type I

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_203587.1 → NP_988918.1  keratin 19

      See identical proteins and their annotated locations for NP_988918.1

      Status: PROVISIONAL

      Source sequence(s)
      BC061624
      UniProtKB/TrEMBL
      Q6P7K6
      Conserved Domains (1) summary
      pfam00038
      Location:101 → 412
      Filament; Intermediate filament protein

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      7700709..7712432
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012971580.3 → XP_012827034.1  keratin 19 isoform X1

      UniProtKB/TrEMBL
      A0A6I8QW47
      Related
      ENSXETP00000077692.2, ENSXETT00000088938.2
      Conserved Domains (1) summary
      pfam00038
      Location:101 → 411
      Filament; Intermediate filament protein
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut