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    Gfod1 Gfo/Idh/MocA-like oxidoreductase domain containing 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 306842, updated on 30-Mar-2024

    Summary

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    Official Symbol
    Gfod1provided by RGD
    Official Full Name
    Gfo/Idh/MocA-like oxidoreductase domain containing 1provided by RGD
    Primary source
    RGD:1311507
    See related
    Ensembl:ENSRNOG00000014007 AllianceGenome:RGD:1311507
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable nucleotide binding activity and oxidoreductase activity. Orthologous to human GFOD1 (glucose-fructose oxidoreductase domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Heart (RPKM 155.5), Brain (RPKM 153.0) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    17p14
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 17 NC_086035.1 (21606090..21710922)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (21400142..21504972)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (23818370..23924393, complement)

    Chromosome 17 - NC_086035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134482769 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC102547830 Neighboring gene eukaryotic translation initiation factor 1-like Neighboring gene TBC1 domain family, member 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    glucose-fructose oxidoreductase domain-containing protein 1
    Names
    glucose-fructose oxidoreductase domain containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001170334.1 → NP_001163805.1  glucose-fructose oxidoreductase domain-containing protein 1

      See identical proteins and their annotated locations for NP_001163805.1

      Status: PROVISIONAL

      Source sequence(s)
      JAXUCZ010000017
      UniProtKB/TrEMBL
      D3ZR63
      Related
      ENSRNOP00000018739.3, ENSRNOT00000018739.6
      Conserved Domains (1) summary
      COG0673
      Location:5 → 363
      MviM; Predicted dehydrogenase [General function prediction only]

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086035.1 Reference GRCr8

      Range
      21606090..21710922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039095674.2 → XP_038951602.1  glucose-fructose oxidoreductase domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      cl40708
      Location:19 → 260
      MviM; Predicted dehydrogenase [General function prediction only]

    2. XM_039095675.2 → XP_038951603.1  glucose-fructose oxidoreductase domain-containing protein 1 isoform X1

      Conserved Domains (1) summary
      cl40708
      Location:19 → 260
      MviM; Predicted dehydrogenase [General function prediction only]

    3. XM_063276380.1 → XP_063132450.1  glucose-fructose oxidoreductase domain-containing protein 1 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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