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    RPGRIP1 RPGR interacting protein 1 [ Bos taurus (cattle) ]

    Gene ID: 282656, updated on 5-Mar-2024

    Summary

    Official Symbol
    RPGRIP1provided by VGNC
    Official Full Name
    RPGR interacting protein 1provided by VGNC
    Primary source
    VGNC:VGNC:34104
    See related
    BGD:BT10455; Ensembl:ENSBTAG00000004694
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    Location:
    chromosome: 10
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (25807379..25862286, complement)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene chromodomain helicase DNA binding protein 8 Neighboring gene uncharacterized LOC104973099 Neighboring gene small nucleolar RNA U6-53/MBII-28 Neighboring gene SPT16 homolog, facilitates chromatin remodeling subunit Neighboring gene histone H2B type 1-L-like Neighboring gene heterogeneous nuclear ribonucleoprotein C

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables thromboxane A2 receptor binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in non-motile cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in retinal rod cell development IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in photoreceptor connecting cilium IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
    Names
    retinitis pigmentosa GTPase regulator interacting protein 1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_181034.2NP_851377.1  X-linked retinitis pigmentosa GTPase regulator-interacting protein 1

      See identical proteins and their annotated locations for NP_851377.1

      Status: PROVISIONAL

      Source sequence(s)
      AF227258
      UniProtKB/Swiss-Prot
      Q9GLJ5, Q9GLJ6, Q9GLJ7, Q9GLM3
      UniProtKB/TrEMBL
      F1MII7
      Related
      ENSBTAP00000091308.1, ENSBTAT00000132599.1
      Conserved Domains (4) summary
      cd00030
      Location:738845
      C2; C2 domain
      pfam09798
      Location:304438
      LCD1; DNA damage checkpoint protein
      pfam11618
      Location:559693
      C2-C2_1; First C2 domain of RPGR-interacting protein 1
      pfam13851
      Location:249523
      GAS; Growth-arrest specific micro-tubule binding

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      25807379..25862286 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)