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    B0334.4 PRELI/MSF1 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 174760, updated on 23-Nov-2023

    Summary

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    Gene symbol
    B0334.4
    Gene description
    PRELI/MSF1 domain-containing protein
    Primary source
    WormBase:WBGene00007144
    Locus tag
    CELE_B0334.4
    See related
    AllianceGenome:WB:WBGene00007144
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable phosphatidic acid transfer activity. Predicted to be involved in phospholipid transport. Predicted to be active in mitochondrial intermembrane space. Is expressed in several structures, including excretory cell; intestine; nervous system; pharynx; and reproductive system. Orthologous to human PRELID1 (PRELI domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: II
    Exon count:
    4
    Sequence:
    Chromosome: II; NC_003280.10 (11495692..11496663)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene 2-hydroxyacyl-CoA lyase 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Chloride channel CLIC-like protein 1 Neighboring gene Membrane magnesium transporter Neighboring gene Phytoene synthase Neighboring gene Uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003280.10

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables phosphatidic acid transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in intermembrane lipid transfer IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in phospholipid transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in mitochondrial intermembrane space IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in mitochondrial intermembrane space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PRELI/MSF1 domain-containing protein
    NP_496457.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      11495692..11496663
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064056.4 → NP_496457.1  PRELI/MSF1 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_496457.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q17476
      Conserved Domains (1) summary
      pfam04707
      Location:16 → 174
      PRELI; PRELI-like family
    Nucleotide Protein
    Heading Accession and Version

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