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    LOC1274634 sorting nexin-6 [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1274634, updated on 4-Jan-2024

    Summary

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    Gene symbol
    LOC1274634
    Gene description
    sorting nexin-6
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 2 NC_064601.1 (55106179..55109921, complement)

    Chromosome 2 - NC_064601.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat protein soc-2 homolog Neighboring gene CDGSH iron-sulfur domain-containing protein 2 homolog Neighboring gene adiponectin receptor protein Neighboring gene actin-related protein 5 Neighboring gene acyl-CoA-binding domain-containing protein 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064601.1 Chromosome 2 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Anopheles gambiae genome: an update. Mongin E, et al. Trends Parasitol, 2004 Feb. PMID 14747013
    2. The genome sequence of the malaria mosquito Anopheles gambiae. Holt RA, et al. Science, 2002 Oct 4. PMID 12364791

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phagosome-lysosome fusion involved in apoptotic cell clearance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064601.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      55106179..55109921 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_313785.4 → XP_313785.3  sorting nexin-6 isoform X2

      See identical proteins and their annotated locations for XP_313785.3

      UniProtKB/TrEMBL
      Q7QA12
      Conserved Domains (2) summary
      cd06892
      Location:47 → 187
      PX_SNX5_like; The phosphoinositide binding Phox Homology domain of Sorting Nexins 5 and 6
      cd07621
      Location:203 → 421
      BAR_SNX5_6; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexins 5 and 6

    2. XM_061641632.1 → XP_061497616.1  sorting nexin-6 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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