U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    GSDMB gasdermin B [ Canis lupus familiaris (dog) ]

    Gene ID: 102155593, updated on 10-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    GSDMB
    Gene description
    gasdermin B
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (23397039..23409303)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (22076281..22088536)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (22553958..22565934)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (22170361..22182611)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (22429557..22441504)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 3C Neighboring gene ORMDL sphingolipid biosynthesis regulator 3 Neighboring gene zona pellucida binding protein 2 Neighboring gene IKAROS family zinc finger 3 Neighboring gene uncharacterized LOC111097358

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-4,5-bisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-4-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in pyroptosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    gasdermin-B

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      23397039..23409303
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038675119.1 → XP_038531047.1  gasdermin-B isoform X1

      Conserved Domains (1) summary
      pfam04598
      Location:5 → 137
      Gasdermin; Gasdermin family

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      22170361..22182611
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038484509.1 → XP_038340437.1  gasdermin-B isoform X2

      Conserved Domains (1) summary
      pfam04598
      Location:5 → 137
      Gasdermin; Gasdermin family

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      22429557..22441504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038610056.1 → XP_038465984.1  gasdermin-B isoform X3

      Conserved Domains (1) summary
      pfam04598
      Location:5 → 137
      Gasdermin; Gasdermin family

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      22553958..22565934
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038546028.1 → XP_038401956.1  gasdermin-B isoform X1

      Conserved Domains (1) summary
      pfam04598
      Location:5 → 137
      Gasdermin; Gasdermin family

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      22076281..22088536
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038619035.1 → XP_038474963.1  gasdermin-B isoform X4

      Conserved Domains (1) summary
      pfam04598
      Location:5 → 137
      Gasdermin; Gasdermin family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.