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    LRRC23 leucine rich repeat containing 23 [ Canis lupus familiaris (dog) ]

    Gene ID: 100856723, updated on 8-Mar-2024

    Summary

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    Official Symbol
    LRRC23provided by VGNC
    Official Full Name
    leucine rich repeat containing 23provided by VGNC
    Primary source
    VGNC:VGNC:57433
    See related
    Ensembl:ENSCAFG00845026868
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 27
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (38481520..38497263, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (8472138..8487809)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (7950869..7966533)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (38355913..38371585, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (38396892..38412613, complement)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene atrophin 1 Neighboring gene enolase 2 Neighboring gene splA/ryanodine receptor domain and SOCS box containing 2 Neighboring gene triosephosphate isomerase 1 Neighboring gene ubiquitin specific peptidase 5 Neighboring gene cell division cycle associated 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      38481520..38497263 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038439147.1 → XP_038295075.1  leucine-rich repeat-containing protein 23 isoform X3

      Conserved Domains (3) summary
      sd00033
      Location:26 → 47
      LRR_RI; leucine-rich repeat [structural motif]
      NF033188
      Location:14 → 87
      internalin_H; InlH/InlC2 family class 1 internalin
      cd21340
      Location:73 → 237
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    2. XM_038439145.1 → XP_038295073.1  leucine-rich repeat-containing protein 23 isoform X1

      UniProtKB/TrEMBL
      A0A8C0Z5T0, A0A8I3PT56
      Related
      ENSCAFP00845037216.1, ENSCAFT00845047433.1
      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    3. XM_038439146.1 → XP_038295074.1  leucine-rich repeat-containing protein 23 isoform X2

      UniProtKB/TrEMBL
      A0A8P0PKU1
      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    4. XM_038439144.1 → XP_038295072.1  leucine-rich repeat-containing protein 23 isoform X1

      UniProtKB/TrEMBL
      A0A8C0Z5T0, A0A8I3PT56
      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      38355913..38371585 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038513810.1 → XP_038369738.1  leucine-rich repeat-containing protein 23 isoform X3

      Conserved Domains (3) summary
      sd00033
      Location:26 → 47
      LRR_RI; leucine-rich repeat [structural motif]
      NF033188
      Location:14 → 87
      internalin_H; InlH/InlC2 family class 1 internalin
      cd21340
      Location:73 → 237
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    2. XM_038513808.1 → XP_038369736.1  leucine-rich repeat-containing protein 23 isoform X1

      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    3. XM_038513809.1 → XP_038369737.1  leucine-rich repeat-containing protein 23 isoform X2

      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    4. XM_038513807.1 → XP_038369735.1  leucine-rich repeat-containing protein 23 isoform X1

      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      38396892..38412613 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038641654.1 → XP_038497582.1  leucine-rich repeat-containing protein 23 isoform X3

      Conserved Domains (3) summary
      sd00033
      Location:26 → 47
      LRR_RI; leucine-rich repeat [structural motif]
      NF033188
      Location:14 → 87
      internalin_H; InlH/InlC2 family class 1 internalin
      cd21340
      Location:73 → 237
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    2. XM_038641652.1 → XP_038497580.1  leucine-rich repeat-containing protein 23 isoform X1

      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    3. XM_038641653.1 → XP_038497581.1  leucine-rich repeat-containing protein 23 isoform X2

      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    4. XM_038641651.1 → XP_038497579.1  leucine-rich repeat-containing protein 23 isoform X1

      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      7950869..7966533
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038576645.1 → XP_038432573.1  leucine-rich repeat-containing protein 23 isoform X3

      Conserved Domains (3) summary
      sd00033
      Location:26 → 47
      LRR_RI; leucine-rich repeat [structural motif]
      NF033188
      Location:14 → 87
      internalin_H; InlH/InlC2 family class 1 internalin
      cd21340
      Location:73 → 237
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    2. XM_038576643.1 → XP_038432571.1  leucine-rich repeat-containing protein 23 isoform X1

      UniProtKB/TrEMBL
      A0A8C0Z5T0, A0A8I3PT56
      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    3. XM_038576644.1 → XP_038432572.1  leucine-rich repeat-containing protein 23 isoform X2

      UniProtKB/TrEMBL
      A0A8P0PKU1
      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    4. XM_038576642.1 → XP_038432570.1  leucine-rich repeat-containing protein 23 isoform X1

      UniProtKB/TrEMBL
      A0A8C0Z5T0, A0A8I3PT56
      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      8472138..8487809
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022410958.2 → XP_022266666.1  leucine-rich repeat-containing protein 23 isoform X3

      Conserved Domains (3) summary
      sd00033
      Location:26 → 47
      LRR_RI; leucine-rich repeat [structural motif]
      NF033188
      Location:14 → 87
      internalin_H; InlH/InlC2 family class 1 internalin
      cd21340
      Location:73 → 237
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    2. XM_003639959.4 → XP_003640007.1  leucine-rich repeat-containing protein 23 isoform X1

      See identical proteins and their annotated locations for XP_003640007.1

      UniProtKB/TrEMBL
      A0A8C0Z5T0, A0A8I3PT56
      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    3. XM_005637216.4 → XP_005637273.1  leucine-rich repeat-containing protein 23 isoform X2

      UniProtKB/TrEMBL
      A0A8P0PKU1
      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42

    4. XM_005637215.4 → XP_005637272.1  leucine-rich repeat-containing protein 23 isoform X1

      See identical proteins and their annotated locations for XP_005637272.1

      UniProtKB/TrEMBL
      A0A8C0Z5T0, A0A8I3PT56
      Conserved Domains (2) summary
      sd00033
      Location:92 → 113
      LRR_RI; leucine-rich repeat [structural motif]
      cd21340
      Location:77 → 303
      PPP1R42; protein phosphatase 1 regulatory subunit 42
    Nucleotide Protein
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