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    TUBA1C tubulin alpha 1c [ Canis lupus familiaris (dog) ]

    Gene ID: 100856405, updated on 8-Mar-2024

    Summary

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    Gene symbol
    TUBA1C
    Gene description
    tubulin alpha 1c
    See related
    Ensembl:ENSCAFG00845020819
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See TUBA1C in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (5385340..5391982, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (40916167..40922842)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (41309181..41315840)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (5350293..5356951, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (5339604..5346261, complement)

    Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene trophinin associated protein Neighboring gene peripherin Neighboring gene uncharacterized LOC111092735 Neighboring gene U6 spliceosomal RNA Neighboring gene tubulin alpha-1A chain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: tubulin alpha-1C chain; tubulin alpha-1C chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051831.1 Reference ROS_Cfam_1.0

      Range
      5385340..5391982 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038438296.1 → XP_038294224.1  tubulin alpha-1C chain

      UniProtKB/TrEMBL
      A0A8C0RPT6, A0A8C0Z5X5, A0A8I3PAA3
      Related
      ENSCAFP00845028901.1, ENSCAFT00845036913.1
      Conserved Domains (1) summary
      PTZ00335
      Location:1 → 448
      PTZ00335; tubulin alpha chain; Provisional

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049287.1 Alternate UMICH_Zoey_3.1

      Range
      5350293..5356951 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038513008.1 → XP_038368936.1  LOW QUALITY PROTEIN: tubulin alpha-1C chain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

      Range
      5339604..5346261 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038640768.1 → XP_038496696.1  tubulin alpha-1C chain

      Conserved Domains (1) summary
      PTZ00335
      Location:1 → 448
      PTZ00335; tubulin alpha chain; Provisional

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

      Range
      41309181..41315840
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038577536.1 → XP_038433464.1  tubulin alpha-1C chain

      UniProtKB/TrEMBL
      A0A8C0RPT6, A0A8C0Z5X5, A0A8I3PAA3
      Conserved Domains (1) summary
      PTZ00335
      Location:1 → 448
      PTZ00335; tubulin alpha chain; Provisional

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      40916167..40922842
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003639960.5 → XP_003640008.1  tubulin alpha-1C chain

      See identical proteins and their annotated locations for XP_003640008.1

      UniProtKB/TrEMBL
      A0A8C0RPT6, A0A8C0Z5X5, A0A8I3PAA3
      Conserved Domains (1) summary
      PTZ00335
      Location:1 → 448
      PTZ00335; tubulin alpha chain; Provisional
    Nucleotide Protein
    Heading Accession and Version

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