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    RFX7 regulatory factor X7 [ Canis lupus familiaris (dog) ]

    Gene ID: 100855421, updated on 8-Mar-2024

    Summary

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    Official Symbol
    RFX7provided by VGNC
    Official Full Name
    regulatory factor X7provided by VGNC
    Primary source
    VGNC:VGNC:45509
    See related
    Ensembl:ENSCAFG00845029424
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    RFXDC2
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 30
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 30 NC_051834.1 (21454945..21587985, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 30 NC_006612.4 (21271114..21403401, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 30 NC_049251.1 (21615905..21748345, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 30 NC_049290.1 (21397971..21530243, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 30 NC_049771.1 (21481748..21614037, complement)

    Chromosome 30 - NC_051834.1Genomic Context describing neighboring genes Neighboring gene NEDD4 E3 ubiquitin protein ligase Neighboring gene importin subunit alpha-1-like Neighboring gene spliceosome-associated protein CWC15 homolog Neighboring gene 40S ribosomal protein SA-like Neighboring gene testis expressed 9 Neighboring gene 40S ribosomal protein S21-like Neighboring gene meiosis specific nuclear structural 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-binding protein RFX7
    Names
    regulatory factor X domain containing 2
    regulatory factor X, 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051834.1 Reference ROS_Cfam_1.0

      Range
      21454945..21587985 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038442406.1 → XP_038298334.1  DNA-binding protein RFX7 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KHB0, A0A8C0TUU2, A0A8I3Q035
      Conserved Domains (3) summary
      pfam05109
      Location:322 → 687
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam18326
      Location:43 → 100
      RFX5_N; RFX5 N-terminal domain
      pfam02257
      Location:105 → 181
      RFX_DNA_binding; RFX DNA-binding domain

    2. XM_038442405.1 → XP_038298333.1  DNA-binding protein RFX7 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KHB0, A0A8C0TUU2, A0A8I3Q035
      Related
      ENSCAFP00845040856.1, ENSCAFT00845052084.1
      Conserved Domains (3) summary
      pfam05109
      Location:322 → 687
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam18326
      Location:43 → 100
      RFX5_N; RFX5 N-terminal domain
      pfam02257
      Location:105 → 181
      RFX_DNA_binding; RFX DNA-binding domain

    3. XM_038442407.1 → XP_038298335.1  DNA-binding protein RFX7 isoform X2

      UniProtKB/TrEMBL
      A0A8C0TTV3
      Conserved Domains (2) summary
      pfam05109
      Location:217 → 582
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam02257
      Location:1 → 76
      RFX_DNA_binding; RFX DNA-binding domain

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049290.1 Alternate UMICH_Zoey_3.1

      Range
      21397971..21530243 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038516860.1 → XP_038372788.1  DNA-binding protein RFX7 isoform X1

      Conserved Domains (3) summary
      pfam05109
      Location:322 → 687
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam18326
      Location:43 → 100
      RFX5_N; RFX5 N-terminal domain
      pfam02257
      Location:105 → 181
      RFX_DNA_binding; RFX DNA-binding domain

    2. XM_038516859.1 → XP_038372787.1  DNA-binding protein RFX7 isoform X1

      Conserved Domains (3) summary
      pfam05109
      Location:322 → 687
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam18326
      Location:43 → 100
      RFX5_N; RFX5 N-terminal domain
      pfam02257
      Location:105 → 181
      RFX_DNA_binding; RFX DNA-binding domain

    3. XM_038516862.1 → XP_038372790.1  DNA-binding protein RFX7 isoform X2

      Conserved Domains (2) summary
      pfam05109
      Location:217 → 582
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam02257
      Location:1 → 76
      RFX_DNA_binding; RFX DNA-binding domain

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049771.1 Alternate UNSW_CanFamBas_1.0

      Range
      21481748..21614037 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038644794.1 → XP_038500722.1  DNA-binding protein RFX7 isoform X1

      Conserved Domains (3) summary
      pfam05109
      Location:322 → 687
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam18326
      Location:43 → 100
      RFX5_N; RFX5 N-terminal domain
      pfam02257
      Location:105 → 181
      RFX_DNA_binding; RFX DNA-binding domain

    2. XM_038644793.1 → XP_038500721.1  DNA-binding protein RFX7 isoform X1

      Conserved Domains (3) summary
      pfam05109
      Location:322 → 687
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam18326
      Location:43 → 100
      RFX5_N; RFX5 N-terminal domain
      pfam02257
      Location:105 → 181
      RFX_DNA_binding; RFX DNA-binding domain

    3. XM_038644795.1 → XP_038500723.1  DNA-binding protein RFX7 isoform X2

      Conserved Domains (2) summary
      pfam05109
      Location:217 → 582
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam02257
      Location:1 → 76
      RFX_DNA_binding; RFX DNA-binding domain

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049251.1 Alternate UU_Cfam_GSD_1.0

      Range
      21615905..21748345 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038580491.1 → XP_038436419.1  DNA-binding protein RFX7 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KHB0, A0A8C0TUU2, A0A8I3Q035
      Conserved Domains (3) summary
      pfam05109
      Location:322 → 687
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam18326
      Location:43 → 100
      RFX5_N; RFX5 N-terminal domain
      pfam02257
      Location:105 → 181
      RFX_DNA_binding; RFX DNA-binding domain

    2. XM_038580490.1 → XP_038436418.1  DNA-binding protein RFX7 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KHB0, A0A8C0TUU2, A0A8I3Q035
      Conserved Domains (3) summary
      pfam05109
      Location:322 → 687
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam18326
      Location:43 → 100
      RFX5_N; RFX5 N-terminal domain
      pfam02257
      Location:105 → 181
      RFX_DNA_binding; RFX DNA-binding domain

    3. XM_038580492.1 → XP_038436420.1  DNA-binding protein RFX7 isoform X2

      UniProtKB/TrEMBL
      A0A8C0TTV3
      Conserved Domains (2) summary
      pfam05109
      Location:217 → 582
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam02257
      Location:1 → 76
      RFX_DNA_binding; RFX DNA-binding domain

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006612.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      21271114..21403401 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003640056.5 → XP_003640104.1  DNA-binding protein RFX7 isoform X1

      See identical proteins and their annotated locations for XP_003640104.1

      UniProtKB/TrEMBL
      A0A8C0KHB0, A0A8C0TUU2, A0A8I3Q035
      Conserved Domains (3) summary
      pfam05109
      Location:322 → 687
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam18326
      Location:43 → 100
      RFX5_N; RFX5 N-terminal domain
      pfam02257
      Location:105 → 181
      RFX_DNA_binding; RFX DNA-binding domain

    2. XM_022412529.2 → XP_022268237.1  DNA-binding protein RFX7 isoform X1

      UniProtKB/TrEMBL
      A0A8C0KHB0, A0A8C0TUU2, A0A8I3Q035
      Conserved Domains (3) summary
      pfam05109
      Location:322 → 687
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam18326
      Location:43 → 100
      RFX5_N; RFX5 N-terminal domain
      pfam02257
      Location:105 → 181
      RFX_DNA_binding; RFX DNA-binding domain

    3. XM_022412530.2 → XP_022268238.1  DNA-binding protein RFX7 isoform X2

      UniProtKB/TrEMBL
      A0A8C0TTV3
      Conserved Domains (2) summary
      pfam05109
      Location:217 → 582
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      pfam02257
      Location:1 → 76
      RFX_DNA_binding; RFX DNA-binding domain
    Nucleotide Protein
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