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    wdtc1 WD and tetratricopeptide repeats 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100493645, updated on 8-Mar-2024

    Summary

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    Official Symbol
    wdtc1provided by Xenbase
    Official Full Name
    WD and tetratricopeptide repeats 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-977179
    See related
    Ensembl:ENSXETG00000020662
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    See wdtc1 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (77977347..77996836, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (52187773..52207261, complement)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene CD164 molecule like 2 Neighboring gene synaptotagmin like 1 Neighboring gene transmembrane protein 222 Neighboring gene WAS protein family member 2 Neighboring gene AT-hook DNA binding motif containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    WD and tetratricopeptide repeats protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      77977347..77996836 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002934641.5 → XP_002934687.2  WD and tetratricopeptide repeats protein 1

      UniProtKB/TrEMBL
      A0A6I8Q1S9, A0A6I8SY40
      Related
      ENSXETP00000066548.1, ENSXETT00000096102.2
      Conserved Domains (4) summary
      PLN03088
      Location:343 → 446
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
      sd00006
      Location:355 → 379
      TPR; TPR repeat [structural motif]
      sd00039
      Location:51 → 87
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:34 → 163
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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