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    mybl1 MYB proto-oncogene like 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100491549, updated on 8-Mar-2024

    Summary

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    Official Symbol
    mybl1provided by Xenbase
    Official Full Name
    MYB proto-oncogene like 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-986560
    See related
    Ensembl:ENSXETG00000029934
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    aMyb; myb2; xmyb2
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 6
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 6 NC_030682.2 (118970362..119006316, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 6 NC_030682.1 (104080142..104115776, complement)

    Chromosome 6 - NC_030682.2Genomic Context describing neighboring genes Neighboring gene alcohol dehydrogenase, iron containing 1 Neighboring gene vexin Neighboring gene valosin containing protein (p97)/p47 complex interacting protein 1 Neighboring gene serum/glucocorticoid regulated kinase family member 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within regulation of gene expression IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    myb-related protein A
    Names
    v-myb avian myeloblastosis viral oncogene homolog-like 1
    v-myb myeloblastosis viral oncogene homolog-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030682.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      118970362..119006316 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031904008.1 → XP_031759868.1  myb-related protein A isoform X2

      UniProtKB/TrEMBL
      A0A6I8R0Y1, A0A8J1JPR1
      Conserved Domains (4) summary
      PLN03091
      Location:83 → 191
      PLN03091; hypothetical protein; Provisional
      pfam13921
      Location:38 → 97
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      pfam07988
      Location:242 → 285
      LMSTEN; LMSTEN motif
      pfam09316
      Location:468 → 631
      Cmyb_C; C-myb, C-terminal

    2. XM_002935319.5 → XP_002935365.2  myb-related protein A isoform X1

      UniProtKB/TrEMBL
      A0A6I8R0Y1, A0A6I8RD90
      Related
      ENSXETP00000079011.2, ENSXETT00000076826.2
      Conserved Domains (4) summary
      PLN03091
      Location:83 → 191
      PLN03091; hypothetical protein; Provisional
      pfam07988
      Location:242 → 286
      LMSTEN; LMSTEN motif
      pfam09316
      Location:469 → 632
      Cmyb_C; C-myb, C-terminal
      pfam13921
      Location:38 → 97
      Myb_DNA-bind_6; Myb-like DNA-binding domain

    3. XM_031904010.1 → XP_031759870.1  myb-related protein A isoform X5

      UniProtKB/TrEMBL
      A0A6I8R0Y1, A0A8J1JS91
      Conserved Domains (4) summary
      PLN03091
      Location:83 → 187
      PLN03091; hypothetical protein; Provisional
      pfam13921
      Location:38 → 97
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      pfam07988
      Location:199 → 242
      LMSTEN; LMSTEN motif
      pfam09316
      Location:425 → 588
      Cmyb_C; C-myb, C-terminal

    4. XM_012965265.3 → XP_012820719.1  myb-related protein A isoform X4

      UniProtKB/TrEMBL
      A0A6I8R0Y1, A0A8J0SGY2
      Conserved Domains (4) summary
      PLN03091
      Location:83 → 187
      PLN03091; hypothetical protein; Provisional
      pfam07988
      Location:199 → 243
      LMSTEN; LMSTEN motif
      pfam09316
      Location:426 → 589
      Cmyb_C; C-myb, C-terminal
      pfam13921
      Location:38 → 97
      Myb_DNA-bind_6; Myb-like DNA-binding domain

    5. XM_031904009.1 → XP_031759869.1  myb-related protein A isoform X3

      UniProtKB/TrEMBL
      A0A6I8R0Y1, A0A803K563
      Related
      ENSXETP00000115494.1, ENSXETT00000114868.1
      Conserved Domains (3) summary
      PLN03091
      Location:83 → 191
      PLN03091; hypothetical protein; Provisional
      pfam13921
      Location:38 → 97
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      pfam09316
      Location:433 → 596
      Cmyb_C; C-myb, C-terminal

    6. XM_031904011.1 → XP_031759871.1  myb-related protein A isoform X7

      UniProtKB/TrEMBL
      A0A6I8R0Y1, A0A8J1JTH1
      Conserved Domains (3) summary
      PLN03091
      Location:83 → 187
      PLN03091; hypothetical protein; Provisional
      pfam13921
      Location:38 → 97
      Myb_DNA-bind_6; Myb-like DNA-binding domain
      pfam09316
      Location:390 → 553
      Cmyb_C; C-myb, C-terminal

    7. XM_012965266.3 → XP_012820720.1  myb-related protein A isoform X6

      UniProtKB/TrEMBL
      A0A6I8R0Y1, F6UHZ8
      Related
      ENSXETP00000008059.5, ENSXETT00000008059.5
      Conserved Domains (4) summary
      PLN03091
      Location:83 → 191
      PLN03091; hypothetical protein; Provisional
      pfam07988
      Location:242 → 286
      LMSTEN; LMSTEN motif
      pfam09316
      Location:469 → 632
      Cmyb_C; C-myb, C-terminal
      pfam13921
      Location:38 → 97
      Myb_DNA-bind_6; Myb-like DNA-binding domain
    Nucleotide Protein Strain
    Heading Accession and Version

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