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    hhat hedgehog acyltransferase [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100490766, updated on 8-Mar-2024

    Summary

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    Official Symbol
    hhatprovided by Xenbase
    Official Full Name
    hedgehog acyltransferaseprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-1011720
    See related
    Ensembl:ENSXETG00000000222
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    skn; ski1; mart2
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (15548163..15692091)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (11763168..11905871)

    Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene synaptotagmin 14 Neighboring gene SERTA domain containing 4 Neighboring gene potassium voltage-gated channel subfamily H member 1 Neighboring gene REST corepressor 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protein-cysteine N-palmitoyltransferase HHAT
    Names
    skinny hedgehog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      15548163..15692091
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031902598.1 → XP_031758458.1  protein-cysteine N-palmitoyltransferase HHAT isoform X1

      UniProtKB/TrEMBL
      A0A8J1JKQ8
      Conserved Domains (1) summary
      cl00738
      Location:163 → 426
      MBOAT; membrane-bound O-acyltransferase family

    2. XM_002934677.5 → XP_002934723.2  protein-cysteine N-palmitoyltransferase HHAT isoform X2

      See identical proteins and their annotated locations for XP_002934723.2

      UniProtKB/TrEMBL
      F6YU00
      Related
      ENSXETP00000000465.5, ENSXETT00000000465.5
      Conserved Domains (1) summary
      cl00738
      Location:139 → 402
      MBOAT; membrane-bound O-acyltransferase family
    Nucleotide Protein Strain
    Heading Accession and Version

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