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    lingo2 leucine rich repeat and Ig domain containing 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100490134, updated on 8-Mar-2024

    Summary

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    Official Symbol
    lingo2provided by Xenbase
    Official Full Name
    leucine rich repeat and Ig domain containing 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-922286
    See related
    Ensembl:ENSXETG00000043850
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    lern3; lrrn6c
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (122842785..122968964, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (110617275..110741459, complement)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene gamma-crystallin-4 Neighboring gene uncharacterized LOC116406523 Neighboring gene crystallin gamma D like 2 gene 2 Neighboring gene uncharacterized LOC116406524 Neighboring gene PC4 and SFRS1 interacting protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      122842785..122968964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004910824.4 → XP_004910881.1  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2

      Related
      ENSXETP00000116529.1, ENSXETT00000115486.1
      Conserved Domains (6) summary
      smart00013
      Location:31 → 64
      LRRNT; Leucine rich repeat N-terminal domain
      sd00033
      Location:87 → 110
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:279 → 337
      LRR_8; Leucine rich repeat
      NF033189
      Location:66 → 285
      internalin_A; class 1 internalin InlA
      cl11960
      Location:429 → 504
      Ig; Immunoglobulin domain
      cl15307
      Location:359 → 402
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    Nucleotide Protein Strain
    Heading Accession and Version

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