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    wdr6 WD repeat domain 6 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100488936, updated on 8-Mar-2024

    Summary

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    Official Symbol
    wdr6provided by Xenbase
    Official Full Name
    WD repeat domain 6provided by Xenbase
    Primary source
    Xenbase:XB-GENE-982770
    See related
    Ensembl:ENSXETG00000009340
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
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    Genomic context

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    See wdr6 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (136671561..136684268)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (126137762..126150457)

    Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene ariadne RBR E3 ubiquitin protein ligase 2 Neighboring gene rab GDP dissociation inhibitor beta Neighboring gene tubulin monoglycylase TTLL3-like Neighboring gene uncharacterized LOC100485975 Neighboring gene DALR anticodon binding domain containing 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    WD repeat-containing protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      136671561..136684268
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002933076.5 → XP_002933122.1  WD repeat-containing protein 6

      See identical proteins and their annotated locations for XP_002933122.1

      UniProtKB/TrEMBL
      A0A803KEE7, F7CZ88
      Related
      ENSXETP00000118746.1, ENSXETT00000121059.1
      Conserved Domains (2) summary
      COG2319
      Location:84 → 435
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:205 → 248
      7WD40; WD40 repeat [structural motif]

    2. XM_004914096.1 → XP_004914153.1  WD repeat-containing protein 6

      See identical proteins and their annotated locations for XP_004914153.1

      UniProtKB/TrEMBL
      A0A803KEE7, F7CZ88
      Related
      ENSXETP00000020576.4, ENSXETT00000020576.4
      Conserved Domains (2) summary
      COG2319
      Location:84 → 435
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:205 → 248
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

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