U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    lrrc2 leucine rich repeat containing 2 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100486200, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    lrrc2provided by Xenbase
    Official Full Name
    leucine rich repeat containing 2provided by Xenbase
    Primary source
    Xenbase:XB-GENE-962135
    See related
    Ensembl:ENSXETG00000009181
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (136626938..136770380)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (124488486..124582982)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene teratocarcinoma-derived growth factor 1, member 2 Neighboring gene teratocarcinoma-derived growth factor 1, member 1 Neighboring gene spindle assembly 6 homolog Neighboring gene uncharacterized LOC116408326

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    leucine-rich repeat-containing protein 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      136626938..136770380
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031890967.1 → XP_031746827.1  leucine-rich repeat-containing protein 2

      UniProtKB/TrEMBL
      F7CP65
      Related
      ENSXETP00000020149.4, ENSXETT00000020149.4
      Conserved Domains (2) summary
      COG4886
      Location:103 → 314
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:119 → 141
      LRR_RI; leucine-rich repeat [structural motif]

    2. XM_002940605.5 → XP_002940651.1  leucine-rich repeat-containing protein 2

      UniProtKB/TrEMBL
      F7CP65
      Conserved Domains (2) summary
      COG4886
      Location:103 → 314
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      sd00033
      Location:119 → 141
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.