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    slc23a3 solute carrier family 23 member 3 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100486175, updated on 8-Mar-2024

    Summary

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    Official Symbol
    slc23a3provided by Xenbase
    Official Full Name
    solute carrier family 23 member 3provided by Xenbase
    Primary source
    Xenbase:XB-GENE-984311
    See related
    Ensembl:ENSXETG00000013878
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    e2bp3; svct3; yspl1
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (83053321..83067085, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (77756324..77769208, complement)

    Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene indian hedgehog Neighboring gene non-homologous end joining factor 1 Neighboring gene protein kinase, AMP-activated, gamma 3 non-catalytic subunit Neighboring gene tubulin tyrosine ligase like 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within organic substance transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    solute carrier family 23 member 3
    Names
    solute carrier family 23 (nucleobase transporters), member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      83053321..83067085 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002933961.4 → XP_002934007.2  solute carrier family 23 member 3 isoform X2

      UniProtKB/TrEMBL
      F6WZA7
      Related
      ENSXETP00000030372.5, ENSXETT00000030372.5
      Conserved Domains (1) summary
      cl23746
      Location:27 → 470
      Xan_ur_permease; Permease family

    2. XM_012971435.2 → XP_012826889.1  solute carrier family 23 member 3 isoform X1

      UniProtKB/TrEMBL
      A0A8J0SZQ1
      Conserved Domains (2) summary
      pfam00860
      Location:27 → 474
      Xan_ur_permease; Permease family
      cl23746
      Location:31 → 485
      HCO3_cotransp; HCO3- transporter family
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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